Microarray Probes on PGSC0003DMT400077934
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22729_PI426222305 |
JHI_St_60k_v1 |
GTTATCCTCTTAGGACTAGCTAGAGCTAGAAGATGTCTTTCATTTTAATTTCTTGTGTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400077934
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400077934 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G46070.1 |
+1 |
2e-32 |
119 |
70/157 (45%) |
C2H2-type zinc finger family protein | chr3:16920445-16920957 REVERSE LENGTH=170 |
Transcript Sequence (847 bp)
>PGSC0003DMT400077934 847 pgsc_dm_v3.4
GAAAACGCGGCGAGATCACTGAATCCGAAAATCTCTACACACTACTAGCGTTTGTCATTA
TGAATAGAACGCGCAAAATGTAACTATAAAATATGTGAAGCAATTGTAAGCCCAAATAGA
TCAGTCATCATTTTATTCAAACTCAGTAGAGAAATATCGAAGCATCTTATTTGTATCTAC
ATTAACCAATTCTTCATAATGACGGCATTAATGAGAAAAAGCAGAGAAGACAACGGTGAC
GTGGAAGCACAAGCAATGGCTAACTGCTTAATGCTTTTATCATCCATAGATCGAGATCGT
CGTGATTCATTTGAATGCAAAACCTGCAAAAGACGGTTCTCATCTTTCCAAGCGCTTGGC
GGCCATCGAACGAGTCATAAATCGATGAAATCAACGATCGACATCGGAAAGTTTCTTCAC
GGAAAATTATCCAAAAAACGCAAGGTACATGAATGTTTAATTTGTGGAATGGAGTTTTCT
ATGGGGCAGGCTTTAGGTGGACATATGAGGCGTCACCGTGCCCCTGTAAATGAAATTAAA
GATTCGTCGTCGGTGAGAAGGATACCAGTTTTGAAGAAATCGAATAGTAGCAAGAGGATA
TTTTGCGTGGATCTTAATTTAACTCCTGATGAGAATGATGATTTTCAGTTTTGGCCTACG
GCACCTGCACCTGTTTTGCGCTGCGTTATCTGATTAATTCCCTCACACACCTCCATTGTT
ATCCTCTTAGGACTAGCTAGAGCTAGAAGATGTCTTTCATTTTAATTTCTTGTGTGTATA
TATCACAAATTCTGTTATCTATTTACCTTAAATGATCAGATTTATTTATTGAGTAGATTT
ATTTACA
