Microarray Probes on PGSC0003DMT400077168
Probe ID | Chip | Probe Sequence |
---|
CUST_41258_PI426222305 |
JHI_St_60k_v1 |
ACTTGGCAGAGAAATTCAAGCCGCGAGATGAAGATAAAGCACTTTCTGAGGTCATTTCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400077168
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400077168 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G52300.1 |
+1 |
8e-10 |
59 |
36/110 (33%) |
CAP160 protein | chr5:21237205-21239404 FORWARD LENGTH=619 |
Transcript Sequence (750 bp)
>PGSC0003DMT400077168 750 pgsc_dm_v3.4
ATGAGCGTAAAGGAAGAAACAAAGCCAGAGAAAGGAGCGTCAATGAAGAACTACTTGGCA
GAGAAATTCAAGCCGCGAGATGAAGATAAAGCACTTTCTGAGGTCATTTCAGGCAAACTT
GCGGGACGGAAGGATAAAACCGAGGGTACTGAACAGGCAAAGCCAACAGAAAAAGTGAAG
GAAAATTCAACGGAAAAAATGGAAAAACCGGAGGGCGTGGCGACACAAAAAGGCTCTACC
GATGAACAGAGGGTGGCGCCTGCTGCTGCGGCGGCAACAACGCATGTTGAAGGTGGAGGA
AAGAGTATGATAAATAGGCTTAAAGGTGTTGCTAGTTCATGGCTTCACAAAGCACCAGCA
GCAGCACCACCATCACAACAGACTCCTACTAGTACTACACATGAAAAAAAAATTGAAACA
CGAAGAACCAGAAAACCCAGACGCATAATAGCAGCCCAGCGAGAAATCGACGAACCAATC
CAGTCCAAATCGAGCAGCCTATCGCAGTGGGTCCTTCTCTGTATGCGAAGCTTCGAGAAT
AATCTAGGTGTCTCCATCTTGCGCCTCGATCGTCCTTCGCTCAAGATCAAGGGCTCTCAT
TCTCTATCCGTTGGAATTGTTAAGTTTTCCGCTGAGTTAAGTAAGCCAGGCCAATGGTCC
GCTTGGGGCCAGCGATGGTCTCCGAGTGCCGGCCATGTCCAGGGTGTAGGCTCGGGAGTG
CCAAACTTGGTATCAGAGCACAGAGTTTAA