Microarray Probes on PGSC0003DMT400076586
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24036_PI426222305 |
JHI_St_60k_v1 |
TGTGAATTTAACAGTACATGATGAATTTGAGCAGGTATCAGTGGATTGTGCAATAGTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076586
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076586 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G01080.1 |
+2 |
6e-08 |
54 |
25/29 (86%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:78038-79176 FORWARD LENGTH=231 |
Transcript Sequence (1530 bp)
>PGSC0003DMT400076586 1530 pgsc_dm_v3.4
AAAATTCGCATGGAGCAGACCTTTAGGATCAACAGCAACCTTTGAAACTCAGGAATATTA
GGCACTCCCTTCTACTATTATTCTTCAATTAAATACTAGGCTTAGTTTCGCTTGGTGCTA
AGCTCGTTCCAATAACCTAAGTCACAAGTCCCTCAAGTCTGGGGTTAGAACAACCATGTC
TTGCTTTATAGACTCTTTCTTGCGTGAGCTCCTTTCTAAACTCTGTCCTGCTTTTAGTTA
AATTAACACTCAATCCTTGGAGTTTTGAGGAGGGGACGGAGCTAGGAATTTTAACAAGGT
TTTGTAACTGTAGCCTAAGTCACCTTTGTCATTACACTAGAAGCTCTCCTTATACTAAGT
GGATTAAATAAGTTCATTACATGTAACTTTGCCTCTGATGCGAGTTTCCTAGTGAATATA
CTACCAAATAGGTAGAGGGACTCGGGAGGTAAGAATAAGAAGGCCAAGCGGCTCCTGATT
ATAAGAACTCTTTCCAGTGAGTTGTGGCTAGTGATTAGTCTCATGCGGTTGGGTATCTTA
ATACTTGAGCTAGTTTTTCACTTCATCCTTTGTGCTAGTTAGTCCTGTATCTCTAGTCGA
CTGTGGTGGAGGGGGCGTTTCTTTGACATTCCAGCCACTTTTACCATCGATTAATCCTAG
AAGTCAAGTCCAGTGCATGATTTACAATGTCAATAGTTAGTACAAATTCACGTCATACAA
TCTCTGTCTATTGGCACAAAGAATTAGTCAGTGGGTATTCCACATCTACTGACTTGAGAA
AATCTTGCATATACCCAAGTGGGTTTAAGTATACTGTACTTGGTCATGCTCCTCCCTTGC
TACAATAATACAATGTGCACTATAGGCAAGAACTAGGGGAGAAGCTAGGTGGTGGCAAAG
TTTCAATTGAATTCTCTTTGCCAGAAAACCATACTGCGCTAAAAGGACGGAAACCATTGT
TGAATGAAGATTCTAGTGTAGTCGCAAAGGGGGTTCAAATGCTAGGTGTGGTTTTCTATG
TATTCTTGGCTCCATAGCCAGTCGCTGCTAAGCCAAGACGATTGTCGATTGTTTTCCTTT
AAAGAATAGTACTGTTAACTTTTAACTATACAAGTATTTTGTCAGCAGTGTGTGTGTGAA
TTTAACAGTACATGATGAATTTGAGCAGGTATCAGTGGATTGTGCAATAGTGATCAGTCC
AAGGAAACAGGCTCTCACATATAAGCAATGTGGATTTGATGGTCTAAGTGTATGACACTG
TTAACCCACAAGGAGCCACATTTGTTGGACTTGGTTAAACAAAGATAGAAAAAAAGCAAA
TTGCAAAAGTAGCATTTGGAAATTTATTTTAGTAAAAGCAAGATTCTATTGAGCCAACTA
ATTGTAGTGAAAAAAAAAGGCATTTAATTATTAACTGAATTTTCTTCTTTATATTTCTTT
TTTGGAAAAAGTTTTGTTCCACGTTGTAAAGTTTTGGACAATATATTGTTATGCCACTCC
TCAATGTCATTTGCTGGTATTATATTTTTA
