Microarray Probes on PGSC0003DMT400076479
Probe ID | Chip | Probe Sequence |
---|
CUST_23929_PI426222305 |
JHI_St_60k_v1 |
GGAACTGTGTATAAATGTTTGTATCAGTTTTGTGAGACTCCTCTCTGTAAAATACTTAGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076479
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076479 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G64550.1 |
+3 |
0.0 |
666 |
364/619 (59%) |
loricrin-related | chr5:25801794-25803698 REVERSE LENGTH=634 |
Transcript Sequence (2127 bp)
>PGSC0003DMT400076479 2127 pgsc_dm_v3.4
AGTTTGTTTTATTTTTCAGGTCAACATTTTCCTAGTGTAGTATGATCACATCCATTGATC
CTAATAAGAACAATATGTACCGTGTTCCAGATGTTGAGCTCGCAAGGAGTGATACAACAT
TAAGATTAGATTGCTTTGGTTATGGAGGAAATGAGTGTGTCAGATTTGGAGGTAGTGGAA
CCAACAGCGGAAGCCATGTTATGCAACAAAATGCTATTGATGATGGGTGTAAATTGGTCC
TTGGTTTGGGGCCAACACCTACAATATGTTCGGACGACTATTATCCTGGTGGATCTAATA
AAAATAAAGGGTTTACAGCCTTGTTGAATCAGGGGCTATTATCTGAGAGTGATTCTATCC
TCAAACTTGGCCTCTCAGGGAGCACCGGTGAAATTTCCAATGCACTTGATTTTTCGGCAA
TCACTCAGAGTACTGCTGGTGAACCTCATCATATCAATCAGCTGTCTTCGGATGGTAAAA
GGCCAACAATCCCTATCCTGGACGAAGGTTCCACATCAGCCAAGAAGTCTGGTGGGTACA
TGCCTTCACTTCTTCTGGCTCCAAGAATTGAGAACAGCCAACTATCCTTCCAAAATAAGG
AAGTTTCAGAGCTGGGTGCAAAATCCCATTTCCATCTCCCTGAGCTGAGCTCCGAGCCTT
CTTGTATCTCTGACTACTCAATGAGTAACCTCTCTGAACCAATGACAATGGCTACATCCT
CACGCAAGATGACCAATCCCAAGAGATGCAAGTTTCCAGGATGCTGCAAAGGAGCTCGAG
GAGCGACAGGTCTTTGCATTGGGCATGGCGGGGGACAGAGATGCCAGAAACCTGGATGCA
ACAAAGGTTCCGAGAGTAGGACTGCATACTGCAAGGCCCATGGAGGAGGGAAGAGGTGCG
AGCACCTGGGATGTACTAAAAGTGCAGAAGGGAAGACCGACTACTGCATAGCACATGGTG
GTGGAAGGCGTTGTAGCTTTCCTGAAGGTTGCACTAGAGCAGCACGTGGCAAGTCAGGCC
TTTGCATCAAGCATGGTGGAGGAAAGAGGTGCAATGTGGAAGGATGCACTCGTAGTGCTG
AGGGGAAAGTTGGCTTGTGCATTTCACATGGTGGTGGACGCCGTTGCCAATTCCCTAGTT
GTTCAAAAGGTGCACAGGGGAGCACTTTGTTCTGCAAAGCACATGGTGGTGGAAAGCGTT
GCATCTTTGCTGGCTGCACCAAAGGTGCTGAAGGGAGTACACCTCTTTGCAAAGCACATG
GGGGTGGAAAGCGGTGTCTCTTTGATGGTGGTGGTATCTGCCCCAAAAGTGTACATGGAG
GCACAAACTTTTGTGTTGCCCATGGTGGTGGGAAGAGGTGTTCTGTTCCAGGATGCACCA
AGAGTGCTCGAGGGCGTACTGATTGTTGTGTTAGGCATGGAGGAGGGAAGCGCTGCAAGT
TTGAAAACTGTGAAAAGAGTGCTCAAGGTAGCACCGACTTTTGCAAGGCTCATGGTGGTG
GTAAGCGTTGCAGCTGGGGAGAGGGGAAGTGCGAGAAGTTTGCTAGGGGCAGAGGAGGGT
TATGTGCTGCTCACAGCAGCTTGTTACATGGGAGGAATACGAATAAAGGAGGCATGATTG
GACCAGGACTTTTCCATGGACTGGTCCCTGCTGCCTCTCCTGTAAAGAGCACTTTTGAGA
ACAATCGTTCTTCGTCTATGGTGAGCATGGTATCAGATTCGGTTCATTCACTCAATAAGC
CAGCTGAATGGCAGCTACTTATACCACCACAGGTATTGGTACCCTTGTCAATGAAGGCCT
CACTAACATGTTCAGAGAAGCTGGATGACAGAAGCACCAACCTTGGGATTGGAAGAAGCA
ACACAAACAACAACTTTGAGTTTGTTGTCCCAGAGGGCAGAGTTCATGGTGGTGGCCTAA
TGACTTTGCTTGGGGGAAACCTGAAAAATGCAATAATGTGAAACCTGTTCACTCTGCTGT
GGGAAGACAATAAATTTGTGATTTCTACTCTCATGAACTAGTATTCAGTTTTCTCTTTGG
AACTGTGTATAAATGTTTGTATCAGTTTTGTGAGACTCCTCTCTGTAAAATACTTAGGAT
ATGATATTGTAACTTGTAATTGTTAAG