Microarray Probes on PGSC0003DMT400076379
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15980_PI426222305 |
JHI_St_60k_v1 |
CGGTTGTTGTTGGATTATAATGGGTATGTTGTTTGTTGAGCATACTGACTTTGTAATAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076379
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076379 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G28260.1 |
+1 |
3e-76 |
267 |
211/666 (32%) |
Telomerase activating protein Est1 | chr1:9875776-9878782 REVERSE LENGTH=880 |
Transcript Sequence (2412 bp)
>PGSC0003DMT400076379 2412 pgsc_dm_v3.4
GTTTTAAATGATGTCAATCATTAGTGTTAGAAACTCTTAAGACTTCAGCTGTTTCTTTAA
TGCAGCTTGGAAGACTTTCAATCTACTGTTGCATCTACTGTGCGACAATTGGAAGGCCTG
GTGGTAATGGATGATGATGAATTAAAGGCTTCTCTCGAGTCTTACCAGTTAATGGATCCA
TTGAGAAGAGGCCCTTATCGTGCTCTTCAACTTGTCTCTGTTTTCATCTTTATCTTCCAT
AGCCTGACTGAGAGTGGGGATGGCTTGGATCCAAAGAAAGATAACAAGCAGCAATCTGCA
TTGACAGAGCTGGCAGTAGCTGCTACTTTTATTTGTGCTGGTCGCCTCGTTGAGAAAGCT
GCAACAAGAAATAGCACACAAACTTGCCCCCTTTTACCCACCGTTTGTGTGTTTGTAGAG
TGGTTAGTTAACATACTTGATAGAGCAGAAGCACACGCAAGAGATGAAAAGGTCCAGAGT
GCTATATCTTACTTTTTTGGTGCTTTAGCTGATCTTCTGAACCGGCTTGATCCTTGTGAG
AATGAACTTGCTCTAGAAAGTACTGCTCTTTGGGAAGACCATGAACTGAAGGGGTTTCAT
CCCATGGCCCATGCTCACAAGTCTTTGGACTTCACGAGCCATTTGGAATGCATTGATAAT
TTCAGTAGTAAGAGTGTGTGTCGTTCACAGCGTATCTTTCGTGCAGCATCTAAACTGGCT
CACAGATCCAGTCACTCAAGAAAATGGATCTCTTATGATAAAACAGACAAAAGATTCCAC
ATCATGGACTCAGAATTAGCAGATAGGGGAAAGCCAGGAGTAGCTGAATCTGTTTCGACT
CTTCCGCTAAAAGAGACCTATCAAAATAATTGTGGAATGGCAATGGAAAACGGAGAGAGT
CAAGATCATCCTTGTCTCAGCAGCCAATCCGTTACCACAGATGAGGAAGAAGTCATTCTT
TTCAAGCCCATCACTAGACATAACTCAGAACCAATATATACATCAGGCACTTCATGTGAT
CAATTCTCCATCAATGTTATCAATGGAACTGCGGCTTCTGATGAATCCTTGCGCCGTGCC
ACATCGTTGATTTCTGAGCAAAGCAATCCACAGAATGATATTTTCAGTTTCCGTCCAGAA
AGTACAAACTTGAGGTACAACAAGCCGCTCAAGCAATCTGCAGCTTTCCCTGCTGGACCT
CCATCTCTGAATGCTTGGGTCCTTGAGAAGGAAAGTCCAAGAAATGAGAAGGGACTAAGG
GAATTAAATAGGCAGCAGTTAAGCCCAATTGATGAACTAGCTTCTGAATCTTTATCTGGT
CTCTCCTTGAATGAAACTAGAGATCACAACGTTCGTTCCATGCCAGTTTCTGCAGCTATT
CATGATACTCCTCCTCCGTATGTCACTCCAGTCCCCTCAGCTCCACTGTTACCGGAAGAT
GCATCTTGGTTTAAGGGAAACTCATCAGTTTTCCCTAACAAGAGTGCATTTGGGACCAAG
GAAGGGGACGGTATTCTTGGTGCATCACCAGTGGGGGGATACTCAAGTCCATCTACAGTT
CGTGGACCACTTGATTTTGTTGCAGGTGCTCCACGCTTTGTTGAGGGGTACCCACCATTA
CTTGGAATGAGTTCATCTGAATGGCTGTATCACTACAGAAATAGTCAAAACTTCGAGCGA
GTCAGCAATCTGGTATGGCCTGTTCACTCAAACGCACCAGCAACCTATGGAAACCTGAAC
GCGACCAATCTTACCAGGTTTGATGTCTTAGATCAATGGGGAAATCACTTGGCTTCTAGT
CCCATGGTGTACTTGGAGAGCCCGCAGTTGCATCCAAGTCCTCCTCTTGCCTATGGTGCA
GAAGAACAAATAATCGATAAACATTTTCTTGGTTACCAAAGAGCATCCCCGTATGTATGT
GGCACTGGAATGGACTTTAGACAGGAGCAGCCAACACTTCTTAACTATCTCAAAGAGAGA
GAACGGCAAATACCACCAGAGTCTCAATATAAAGGTCCTAATTTTATGGGAAACTAAGCT
CTATGAATACTCATTATCTATCAGGCATTTTTCCACCTGCATTGCCTTAATTCTCAACGT
ATAAATACATGAATTGCGGCATCACAAACTTTCTAAGTGTGAAATGTGTACCAATTTAGA
TGGATGAAATATAGAAATGTATGCATTTAATTGGTTGTGAACTGAGAAAGTGTTATCTAG
AATCTTTAACTTGTAGAATTGTTGAAGATGAATGCACTTTTCTCATTTTGTAAAGTTGTT
TTGTTTTTTAAAAGTCATCTGCAGTGAATGTTTATAGCAAAGAATTGTAGAACATGAGCA
TATAGACGGTTGTTGTTGGATTATAATGGGTATGTTGTTTGTTGAGCATACTGACTTTGT
AATAGAAAATTT
