Microarray Probes on PGSC0003DMT400075880
Probe ID | Chip | Probe Sequence |
---|
CUST_29503_PI426222305 |
JHI_St_60k_v1 |
ATTGTTGCATTTGTAGAGGAGGCAGGGGTCTTCAATTTCCAAATGAGTAAAATGTTAGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075880
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075880 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G14720.1 |
+1 |
2e-155 |
448 |
210/311 (68%) |
xyloglucan endotransglucosylase/hydrolase 28 | chr1:5066806-5068466 REVERSE LENGTH=332 |
Transcript Sequence (1394 bp)
>PGSC0003DMT400075880 1394 pgsc_dm_v3.4
CTCCAACTTCCCTTTTAAATTTTTTTTTAAAAAATGGTGAATTTTCTTCTGGAAATTTTT
ATATTTTGCTATGTTCTTGTATTAGTTTCTGGATTTTCAGAAAAGCTCGAAACATTGCCG
TTTCATGAAGGATATTCACAACTTTTTGGTCATGATAATCTTATGGTCCTTCAAGATGAA
AAATCAGTTCATATCTCTCTAGATGAAAGAACAGGAGCTGGATTTGTATCACAAGACTTG
TACCTTCTTGGCTTGTTCAGTGCTTCTATTAAATTACCAGAAGATTACACTGCTGGAGTG
GTTGTTGCATTTTATATGTCAAATGGAGACATGTTTGAGAAGAATCATGATGAAATTGAC
TTTGAGTTCTTGGGAAATATTAGAGCAAAAAATTGGAGAATTCAAACTAATATTTATGGA
AATGGTAGCACAAATGTTGGTAGAGAAGAAAGATATGGACTTTGGTTTGATCCAACTGAA
GATTTTCATACATACACAATTCTTTGGACTGACAGCCACATCATCTTTTATGTAGATAAT
GTACCTATAAGAGAGATCAAGAGGACACAAGCAATGGGTGGGGACTTCCCTTCTAAGCCA
ATGTCTTTATATGCTACAATATGGGATGGTTCTAGTTGGGCTACCAATGGGGGAAAATAC
AAAGTCAATTACAAATATGCCCCTTACGTCACCAAGTTCTCCGATTTCGTCCTCCACGGA
TGTGCAGTTGATCCAATTGAATTGTCTCCCAAATGTGACATTGTCCAGGATTCTGCATCC
ATTCCAACTGAAATATCCCCTGATCAAAGACGAAAAATGGAGAGGTTTCGAAAAAAGCAC
TTGCAATATTCATACTGCTATGACCGGACACGATACAATGTCCCTCTATCTGAATGTGTA
ATTGATCCTAAGGAAGCTAATCGTCTCCGAGGATTTGACCCCGTGACCTTTGGTGGTGTC
CATCGTCATAACAACAAACGACACCACCAGAGGCAATCGAGGAGGGAAGATACGTCCGCG
AAATAAAAAAGAAGGATATTGTAGTTTCTTGTTGATATTTTGTGTCCAGATTGATTGAGG
ATATGGTGATTTTTCACACTGAATAGAGAATACAAAGAGAAAAGAGAGGTAAATGGGATT
TTAGTATTTACTACTATTTAGTGTACTATTATATATTTTTCATGAATCATGATGGGGTAT
GTATGTATATATATTTCTAGCTTGTTTTGTTGATGTTTAGTACTATTTGGGATTCTATTA
TTTATTCAATTTGGTGATGATTTTTTTGTGAACTTCGGTTAATTACATACCGTTAGATGT
TACATATTTACAACATTGTTGCATTTGTAGAGGAGGCAGGGGTCTTCAATTTCCAAATGA
GTAAAATGTTAGGA