Microarray Probes on PGSC0003DMT400075701

Probe IDChipProbe Sequence
CUST_29383_PI426222305 JHI_St_60k_v1 CCATTCGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGGGTCCG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075701

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Source Transcript PGSC0003DMT400075701 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G11330.2 +1 1e-171 526 277/604 (46%) S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842

Transcript Sequence (2882 bp)

>PGSC0003DMT400075701 2882 pgsc_dm_v3.4
AAAAAGATGAGCAACAGCAGCAGCAGAAGAAGAAATTTGCAATATTTTGTTCATATAATT
CTTGTTATTCTTCGTTTTATCGATACAGGATTATGCAGTGAAGTGGATAACATTACCAGC
ATTCAATCTCTGAGAGATCCTGGAATTTTATCGTCTCCAGGAGGCGTATTCAAGTTAGGA
TTTTTCAGTCCTCAAAACAGTACTAATAGGTATGTTGGTATTTGGTACAATTTTTCTGTA
ACAACTGTCATTTGGGTGGCTAATAGGGACAAACCTTTAAGAGATTCTTCTGGTGTTGTA
AAGATATCTCGTGATGGAAATGTCGTTATAACGAATGGAGAGGAGGAGATTCTTTGGTCA
TCAAATGTTTCAACTTCTCAGGTAAACTCAATTGGCCTTCTCCAAGATTCTGGGAACTTT
GTTCTCGTTGATCATCGGGACAATATGAGCACTATATGGCAGAGTTTTGAACATCCTTCT
GATTCAACTATTCCTAGAATGAGAATAAGTGAAAATACAAGGACAGGGGAGATGGTAGAA
GCAAGATCTTGGAGAAGTCCTTCGGATCCTAATATCGGAGACTTTTCTTTAAGAATGAAC
TCTGGAGTCATTCCTCAAGTGTATATATGGAAAGGAAACCGTCCCTATTGGCGAACTGGT
CAATGGAATGGACAGATCTTTATAGGAGTGCAGAATATGTATGCTGTGGTATCTGATGGA
TTTAATGTAGTGAATGATCGCGAAGGTACTGTATATTTTACTGGACCTATTCGTGATAAT
TTTTTAAGGATATTAGTCTTGGATTGGAGAGGGAACTTGGTTCAATCATATTGGAATGTG
ACTGAGACAAACTGGAAGATAATATGGTCAGCTCCCAGTAACAATTGTGAAGTTTATGGA
ACGTGTGGTCCATTTGGGAGCTGCAATCATTTGGAGTCGCCGGTCTGTTCTTGTCTGAAA
GGTTTCGAGCCAAAGCATAGGGAAGAATGGGAAAAGGGGAATTGGACTAGTGGTTGTGTT
AGGAGGAGTGCTTTGCAATGTGAAGTTAAGAATAACACCGCGAATTCAAGTAAAGAAGAC
GGATTTCTAAAGATGGAGTTGATGAAATTGCCTGATTTTGCTGAAAGGTCATCTACTTCA
GAAGACTTATGTAGAAGCCAATGCTTGGGGAATTGTTCCTGCATAGGGTATGCATTTGAT
TCAGGTATCGGCTGTATGTCGTGGAGTGAAATGATTGACATTCAGCAGTTCCAAAGCTCG
GGGAAAGATCTCTATATTCACGTGGCAAATTCAGAGCTTGTGTTTTCTGCAGATCATGGT
AAAGACATAAAGAAAATCGTAATTCCAGTAATTGTTGGTTCTCTTACACTCTGTGTTTGT
CTGTTCCTTTGCTATACAATGGTGATCAGACGTAGAGGAGTGAAAAGAGAGGAGGTAGCT
TTACTTGGTAACAAAAGTCCAGTTAATATGGAAGAATTACCAGTCTTCAGCCTCGATACG
ATTGCAAATGCAACATCCCAATTCAATGAGGATAATAAGCTTGGTCAGGGCGGTTTTGGT
CCAGTTTACAAGGGGAAATTGGAAGATGGGAAAGAAATAGCTGTCAAGAGGCTCTCAAAA
GCCTCGAAACAAGGGCTGGAGGAGTTCATGAATGAAGTGTTGGTGATCTCGAAAGTCCAA
CATAGAAACCTTGTTAGACTCTGTGGATGCTGTGTCGATAAAGAGGAGAAGATGCTGATT
TATGAATATATGCCAAAGAAAAGCTTAGATGTGTTTCTCTTTGGTTAGTCCTTGTTACTT
CTCATCTGCATTACTCCACATCTATGTTGCTCGGACTCTTCAATAATGTTGATGGATGCT
TGCTAGATCCCCCAAAAGTACTGCATTTTTGGAGGATCCAACATGAGTACATCAGCATTC
TGAGCAACATTACTCCACATTTCTTCTGATCCTTTTGTTTAAATTCTCCATTCATATTTG
ACAAACATCTAGATGAAGCACATCGAGACATTTTGGATTGGACAAAACGTTCCATTATAA
TCGAAGGAGTTGGTCGAGGACTCCTTTATCTACACAGAGATTCAAGATTGAAGATAATTC
ATAGAGATCTAAAGCCAAGTAACATCTTGCTCGATAATAACTTCAATCCAAAGATTTCAG
ATTTTGGCATGGCTAGGATTTTCGGATCTGATCAAGATCAAGCAGACACAATGAGAGTAG
TTGGTACTTAGTAAGTGATCATTTATCTATATACAATACCATAACTTTGCATAATTTAAC
TACTCGAATCGTACTGACATATTTACAGTGGATACATGGCACCCGAATATGCAATGGAAG
GAAGATTCTCAGAGAAATCCGATGTTTTCAGCTTTGGAGTTCTAGTCTTAGAGATCATAA
GTGGTCGAAAAAGTACAAATTCTTGGACTGAGACATCCTCTTTGAGCCTTTTGGGATATG
CATGGAAGTTATGGAAAGAACAAGATTTATCAACTTTTATCGATCCGTTTATATTGAATC
CGAGCTCGGAAATAGAGATCAGAAAATGCATACAGATTGGTTTACTATGTGTACAAGAAT
TTGCTGAAGACAGGCCAAGTATTTCATCTGTTCTTGTTATGCTTACTAGTGAAACAACAA
GTCTTCCAGCACCATCACAACCTGCTTTTACTGAAAGAAGACACTTCAGAATGTGCAATG
AAAATAGAGAAACTAAGTTTACTTTGAACAAAATGAGTATCACAAACCTTACTGGTAGAT
AACATGAGCATATGAAATTACTTTTTAAAGATTTGCACAATTGTTATAGTATGATCCATT
CGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGGGTCCGTGTAA
AG