Microarray Probes on PGSC0003DMT400075701
Probe ID | Chip | Probe Sequence |
---|
CUST_29383_PI426222305 |
JHI_St_60k_v1 |
CCATTCGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGGGTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075701
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075701 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G11330.2 |
+1 |
1e-171 |
526 |
277/604 (46%) |
S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842 |
Transcript Sequence (2882 bp)
>PGSC0003DMT400075701 2882 pgsc_dm_v3.4
AAAAAGATGAGCAACAGCAGCAGCAGAAGAAGAAATTTGCAATATTTTGTTCATATAATT
CTTGTTATTCTTCGTTTTATCGATACAGGATTATGCAGTGAAGTGGATAACATTACCAGC
ATTCAATCTCTGAGAGATCCTGGAATTTTATCGTCTCCAGGAGGCGTATTCAAGTTAGGA
TTTTTCAGTCCTCAAAACAGTACTAATAGGTATGTTGGTATTTGGTACAATTTTTCTGTA
ACAACTGTCATTTGGGTGGCTAATAGGGACAAACCTTTAAGAGATTCTTCTGGTGTTGTA
AAGATATCTCGTGATGGAAATGTCGTTATAACGAATGGAGAGGAGGAGATTCTTTGGTCA
TCAAATGTTTCAACTTCTCAGGTAAACTCAATTGGCCTTCTCCAAGATTCTGGGAACTTT
GTTCTCGTTGATCATCGGGACAATATGAGCACTATATGGCAGAGTTTTGAACATCCTTCT
GATTCAACTATTCCTAGAATGAGAATAAGTGAAAATACAAGGACAGGGGAGATGGTAGAA
GCAAGATCTTGGAGAAGTCCTTCGGATCCTAATATCGGAGACTTTTCTTTAAGAATGAAC
TCTGGAGTCATTCCTCAAGTGTATATATGGAAAGGAAACCGTCCCTATTGGCGAACTGGT
CAATGGAATGGACAGATCTTTATAGGAGTGCAGAATATGTATGCTGTGGTATCTGATGGA
TTTAATGTAGTGAATGATCGCGAAGGTACTGTATATTTTACTGGACCTATTCGTGATAAT
TTTTTAAGGATATTAGTCTTGGATTGGAGAGGGAACTTGGTTCAATCATATTGGAATGTG
ACTGAGACAAACTGGAAGATAATATGGTCAGCTCCCAGTAACAATTGTGAAGTTTATGGA
ACGTGTGGTCCATTTGGGAGCTGCAATCATTTGGAGTCGCCGGTCTGTTCTTGTCTGAAA
GGTTTCGAGCCAAAGCATAGGGAAGAATGGGAAAAGGGGAATTGGACTAGTGGTTGTGTT
AGGAGGAGTGCTTTGCAATGTGAAGTTAAGAATAACACCGCGAATTCAAGTAAAGAAGAC
GGATTTCTAAAGATGGAGTTGATGAAATTGCCTGATTTTGCTGAAAGGTCATCTACTTCA
GAAGACTTATGTAGAAGCCAATGCTTGGGGAATTGTTCCTGCATAGGGTATGCATTTGAT
TCAGGTATCGGCTGTATGTCGTGGAGTGAAATGATTGACATTCAGCAGTTCCAAAGCTCG
GGGAAAGATCTCTATATTCACGTGGCAAATTCAGAGCTTGTGTTTTCTGCAGATCATGGT
AAAGACATAAAGAAAATCGTAATTCCAGTAATTGTTGGTTCTCTTACACTCTGTGTTTGT
CTGTTCCTTTGCTATACAATGGTGATCAGACGTAGAGGAGTGAAAAGAGAGGAGGTAGCT
TTACTTGGTAACAAAAGTCCAGTTAATATGGAAGAATTACCAGTCTTCAGCCTCGATACG
ATTGCAAATGCAACATCCCAATTCAATGAGGATAATAAGCTTGGTCAGGGCGGTTTTGGT
CCAGTTTACAAGGGGAAATTGGAAGATGGGAAAGAAATAGCTGTCAAGAGGCTCTCAAAA
GCCTCGAAACAAGGGCTGGAGGAGTTCATGAATGAAGTGTTGGTGATCTCGAAAGTCCAA
CATAGAAACCTTGTTAGACTCTGTGGATGCTGTGTCGATAAAGAGGAGAAGATGCTGATT
TATGAATATATGCCAAAGAAAAGCTTAGATGTGTTTCTCTTTGGTTAGTCCTTGTTACTT
CTCATCTGCATTACTCCACATCTATGTTGCTCGGACTCTTCAATAATGTTGATGGATGCT
TGCTAGATCCCCCAAAAGTACTGCATTTTTGGAGGATCCAACATGAGTACATCAGCATTC
TGAGCAACATTACTCCACATTTCTTCTGATCCTTTTGTTTAAATTCTCCATTCATATTTG
ACAAACATCTAGATGAAGCACATCGAGACATTTTGGATTGGACAAAACGTTCCATTATAA
TCGAAGGAGTTGGTCGAGGACTCCTTTATCTACACAGAGATTCAAGATTGAAGATAATTC
ATAGAGATCTAAAGCCAAGTAACATCTTGCTCGATAATAACTTCAATCCAAAGATTTCAG
ATTTTGGCATGGCTAGGATTTTCGGATCTGATCAAGATCAAGCAGACACAATGAGAGTAG
TTGGTACTTAGTAAGTGATCATTTATCTATATACAATACCATAACTTTGCATAATTTAAC
TACTCGAATCGTACTGACATATTTACAGTGGATACATGGCACCCGAATATGCAATGGAAG
GAAGATTCTCAGAGAAATCCGATGTTTTCAGCTTTGGAGTTCTAGTCTTAGAGATCATAA
GTGGTCGAAAAAGTACAAATTCTTGGACTGAGACATCCTCTTTGAGCCTTTTGGGATATG
CATGGAAGTTATGGAAAGAACAAGATTTATCAACTTTTATCGATCCGTTTATATTGAATC
CGAGCTCGGAAATAGAGATCAGAAAATGCATACAGATTGGTTTACTATGTGTACAAGAAT
TTGCTGAAGACAGGCCAAGTATTTCATCTGTTCTTGTTATGCTTACTAGTGAAACAACAA
GTCTTCCAGCACCATCACAACCTGCTTTTACTGAAAGAAGACACTTCAGAATGTGCAATG
AAAATAGAGAAACTAAGTTTACTTTGAACAAAATGAGTATCACAAACCTTACTGGTAGAT
AACATGAGCATATGAAATTACTTTTTAAAGATTTGCACAATTGTTATAGTATGATCCATT
CGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGGGTCCGTGTAA
AG