Microarray Probes on PGSC0003DMT400075698
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29464_PI426222305 |
JHI_St_60k_v1 |
CCATTCGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGGGTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075698
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075698 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G11330.2 |
+1 |
8e-85 |
275 |
136/226 (60%) |
S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842 |
Transcript Sequence (912 bp)
>PGSC0003DMT400075698 912 pgsc_dm_v3.4
CGAGAACATCAACAATTTTGGGGAGTCTGAGCAACATTGCTCCACATTTCTTCTGAAGCA
AAGTTAATCCCTTCTCCATTCATATTTGACAAACATCTAGATGAAGGCCACCGAGGCATT
TTGGATTGGAGAAAACGTTCCACTATAATCGAAGGGGTTGGTCGAGGACTCCTTTATCTT
CACAGAGATTCAAGATTGAAGATAATTCATAGAGATCTGAAGCCAAGTAACATTTTGCTC
GATAATGACTTCAATCCAAAGATTTCAGATTTTGGCATGGCTAGGATTTTCGGATCTGAC
CAAGATCAAGCAGACACAAGGAGAGTAGTTGGTACTTATGGATACATGGCACCCGAATAT
GCAATGGAAGGAAGATTCTCAGAGAAATCCGATGTTTTCAGCTTTGGAGTTCTAGTCTTA
GAGATCATAAGTGGTCGAAAAAGTACAAATTCTTGGACTGAGACATCCTCTTTGAGCCTT
TTGGGATATGCATGGAAGTTATGGAAAGAACAAGATTTATCAACTTTTATCGATCCGTTT
ATATTGAATCCGAGCTCGGAAATAGAGATCAGAAAATGCATACAGATTGGTTTACTATGT
GTACAAGAATTTGCTGAAGACAGGCCAAGTATTTCATCTGTTCTTGTTATGCTTACTAGT
GAAACAACAAGTCTTCCAGCACCATCACAACCTGCTTTTACTGAAAGAAGACACTTCAGA
ATGTGCAATGAAAATAGAGAAACTAAGTTTACTTTGAACAAAATGAGTATCACAAACCTT
ACTGGTAGATAACATGAGCATATGAAATTACTTTTTAAAGATTTGCACAATTGTTATAGT
ATGATCCATTCGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGG
GTCCGTGTAAAG
