Microarray Probes on PGSC0003DMT400075696
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29415_PI426222305 |
JHI_St_60k_v1 |
TAAAGAGGTCTGACCGACTATATCATGTACCTTATATTTCAGGCATGGAAGTTATGGAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075696
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075696 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G11330.2 |
+1 |
0.0 |
680 |
356/728 (49%) |
S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842 |
Transcript Sequence (2872 bp)
>PGSC0003DMT400075696 2872 pgsc_dm_v3.4
GGTAATAGGAAGAGTATTAGAAAACCAAAAAAGATGACCACTAGCAGCAGAAATGTGCAT
CATTTTGTTCATCTAATTCTTGTTATTCTTCATTGTTTTAATACAGGATTTTGCACAGAA
GTAGATAGCATTACCAGCACTCTATCTCTGAGGGATCCTGGGATTTTATCATCTCCAGGA
GGCGTCTTGAAGTTGGGATTTTTCAGTCCTCTAAACAGCTCTAACAGGTATGTTGGTATT
TGGTACAATTTTTCTGAAACGATTGTCATTTGGGTGGCTAATAGGGACAAACCTTTAAGA
GATTCTTCTGGGGTTGTCAAAATATCTGGTGATGGAAATATCTTAGTTATGAACGGGGAG
GAGGAGATTCTTTGGTCATCAAATGTTTCAACCTCTCAGGTAAACTCAATTGCCCTTCTC
CAAGATTCTGGGAATTTTGTTCTTGTAGATCATCTGAACAATGGGAGCACAATATGGCAG
AGTTTTGAACATCCTTCTGATTCAATTGTCCCTAAAATGAGATTAAGTGAAAACACAAGG
ACAGGGGAGAGGGTAGAAGTAAAATCTTGGAGAAGCCCTTGGGATCCTAATTTCGGAAAC
TTTTCTTTAGGAATGAATTCTGGATTCATTCCTCAGGTGTATATCTGGAAAGGTAGTCAT
CCCTATTGGCGAAGTGGTCAATGGAATGGCCAGATCTTTATCGGAGTGCAGGGTATGTAT
TCTGTGTCGTCTGATGGATTCAATGTAGTGAACGATCGCGAAGGTACTGTATACCTTACT
GGCCCTGGTGATTTTGATTTCTTAACGAAATTTGTCTTGGATTGGAAAGGGAATTTGGTT
CAATCATATTGGGATGTGAATGAGACAAACTGGAAGATAATATGGTCAGCTCCCAATAAC
GATTGTGAAGTTTATGGAACATGTGGTCCATTTGGGAGCTGCAATTTGGAGTCGCCGATC
TGTTCTTGTCTGAAAGGTTTTGAGCCAAAGCACAGGGAAGAATGGGAAAAGGGGAATTGG
ACTAGTGGTTGTGTTAGGAGGAAAGCTTTGCAATGTGAAGTAAGGAATAACTCAGGGGAT
TCAAGTAAAGAAGACGGATTTCTAAAGATAGGGTCAATAAAATTGCCTGATTTTGCAGAA
AGGTCATCGACTAGAGAAGACCAATGTAAAAGCCAATGCTTGGGATATTGTTCCTGCATA
GCGTATGCATATGACTCAGGTACTGGCTGTATGTCATGGAGTAACAACTTGATTGATATT
CAGCAGTTCCAAAGCTCGGGGAAAGATCTCTATATTCGCGTGGCACATTCAGAGCTTGAT
CATCATAAAGACATAAAGAAAATTGTAATTCCAGTAATCCTTGGTTTTCTTACACTCTGT
GTTTGTCTGTTCCTTTGCTGTACATGGATGGCCAGACTTAGAGGAGTAAAAAGGAAGAAG
ATAAATTTACTTGGTGACAGAAGTGCAGTTCATATGGAAGAGTTACCAGTCTTCAGCCTC
GATACGCTTGCAAATGCAACATCCCAATTCCATGAGGATAAGAAGCTTGGTCAGGGCGGT
TTTGGTCCAGTTTACATGGTACAATTTTCTTCTCTCTCGATCACTTTTCAAATTTCAGTT
GCTGAAATTGCTGATTACTTGTAGGGAAAATTGGAAGACGGGAAAGAAATAGCAGTCAAG
AGGCTTTCAAAAGCCTCGGGACAAGGGCTGGAGGAGTTCATGAATGAAGTGTTGGTGATC
TCGAAAGTCCAACATAGAAACCTTGTTAGACTTTTGGGATGTTGCGTTGATAAAGAGGAG
AAGATGTTGATTTATGAATATATGCCCAAGAAAAGCTTGGATGTGTTTCTCTTTGATGAA
GGCCACCGAGGCATTTTGGATTGGAGAAAACGTTCCACTATAATCGAAGGGGTTGGTCGA
GGACTCCTTTATCTTCACAGAGATTCAAGATTGAAGATAATTCATAGAGATCTGAAGCCA
AGTAACATTTTGCTCGATAATGACTTCAATCCAAAGATTTCAGATTTTGGCATGGCTAGG
ATTTTCGGATCTGACCAAGATCAAGCAGACACAAGGAGAGTAGTTGGTACTTATGGATAC
ATGGCACCCGAATATGCAATGGAAGGAAGATTCTCAGAGAAATCCGATGTTTTCAGCTTT
GGAGTTCTAGTCTTAGAGATCATAAGTGGTCGAAAAAGTACAAATTCTTGGACTGAGACA
TCCTCTTTGAGCCTTTTGGGATATGTAAGACTCCTCTTATAGTTGCTATAGCGAAATGTT
TGTTATAAAGAACGTATAATATAACATAACATGAAGAATCAGTTCCAAAAAAGAACTTGG
CTGTTATATAATGAAATGTTATTATAGAGGACGACTATTATAAAGAGGTCTGACCGACTA
TATCATGTACCTTATATTTCAGGCATGGAAGTTATGGAAAGAACAAGATTTATCAACTTT
TATCGATCCGTTTATATTGAATCCGAGCTCGGAAATAGAGATCAGAAAATGCATACAGAT
TGGTTTACTATGTGTACAAGAATTTGCTGAAGACAGGCCAAGTATTTCATCTGTTCTTGT
TATGCTTACTAGTGAAACAACAAGTCTTCCAGCACCATCACAACCTGCTTTTACTGAAAG
AAGACACTTCAGAATGTGCAATGAAAATAGAGAAACTAAGTTTACTTTGAACAAAATGAG
TATCACAAACCTTACTGGTAGATAACATGAGCATATGAAATTACTTTTTAAAGATTTGCA
CAATTGTTATAGTATGATCCATTCGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGT
TTGACAATATTGGGTCCGTGTAAAGCACAGAATATTTGTTATTAGTTACAAA
