Microarray Probes on PGSC0003DMT400075694
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29494_PI426222305 |
JHI_St_60k_v1 |
AGAGTAGTTGGTACTTATGGATACATGGCCCCTGAATATGCAATGAAAGGAAGATTCTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075694
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075694 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G11350.1 |
+1 |
0.0 |
730 |
372/819 (45%) |
S-domain-1 13 | chr1:3817725-3820752 REVERSE LENGTH=830 |
Transcript Sequence (2504 bp)
>PGSC0003DMT400075694 2504 pgsc_dm_v3.4
GGTAATAGGAAGAGTATTAGAAAACCAAAAAAGATGACCACTAGCAGCAGAAATGTGCAT
CATTTTGTTCATCTAATTCTTGTTATTCTTCATTGTTTTAATACAGGATTTTGCACAGAA
GTAGATAGCATTACCAGCACTCTATCTCTGAGGGATCCTGGGATTTTATCATCTCCAGGA
GGCGTCTTGAAGTTGGGATTTTTCAGTCCTCTAAACAGCTCTAACAGGTATGTTGGTATT
TGGTACAATTTTTCTGAAACGATTGTCATTTGGGTGGCTAATAGGGACAAACCTTTAAGA
GATTCTTCTGGGGTTGTCAAAATATCTGGTGATGGAAATATCTTAGTTATGAACGGGGAG
GAGGAGATTCTTTGGTCATCAAATGTTTCAACCTCTCAGGTAAACTCAATTGCCCTTCTC
CAAGATTCTGGGAATTTTGTTCTTGTAGATCATCTGAACAATGGGAGCACAATATGGCAG
AGTTTTGAACATCCTTCTGATTCAATTGTCCCTAAAATGAGATTAAGTGAAAACACAAGG
ACAGGGGAGAGGGTAGAAGTAAAATCTTGGAGAAGCCCTTGGGATCCTAATTTCGGAAAC
TTTTCTTTAGGAATGAATTCTGGATTCATTCCTCAGGTGTATATCTGGAAAGGTAGTCAT
CCCTATTGGCGAAGTGGTCAATGGAATGGCCAGATCTTTATCGGAGTGCAGGGTATGTAT
TCTGTGTCGTCTGATGGATTCAATGTAGTGAACGATCGCGAAGGTACTGTATACCTTACT
GGCCCTGGTGATTTTGATTTCTTAACGAAATTTGTCTTGGATTGGAAAGGGAATTTGGTT
CAATCATATTGGGATGTGAATGAGACAAACTGGAAGATAATATGGTCAGCTCCCAATAAC
GATTGTGAAGTTTATGGAACATGTGGTCCATTTGGGAGCTGCAATTTGGAGTCGCCGATC
TGTTCTTGTCTGAAAGGTTTTGAGCCAAAGCACAGGGAAGAATGGGAAAAGGGGAATTGG
ACTAGTGGTTGTGTTAGGAGGAAAGCTTTGCAATGTGAAGTAAGGAATAACTCAGGGGAT
TCAAGTAAAGAAGACGGATTTCTAAAGATAGGGTCAATAAAATTGCCTGATTTTGCAGAA
AGGTCATCGACTAGAGAAGACCAATGTAAAAGCCAATGCTTGGGATATTGTTCCTGCATA
GCGTATGCATATGACTCAGGTACTGGCTGTATGTCATGGAGTAACAACTTGATTGATATT
CAGCAGTTCCAAAGCTCGGGGAAAGATCTCTATATTCGCGTGGCACATTCAGAGCTTGAT
CATCATAAAGACATAAAGAAAATTGTAATTCCAGTAATCCTTGGTTTTCTTACACTCTGT
GTTTGTCTGTTCCTTTGCTGTACATGGATGGCCAGACTTAGAGGAGTAAAAAGGAAGAAG
ATAAATTTACTTGGTGACAGAAGTGCAGTTCATATGGAAGAGTTACCAGTCTTCAGCCTC
GATACGCTTGCAAATGCAACATCCCAATTCCATGAGGATAAGAAGCTTGGTCAGGGCGGT
TTTGGTCCAGTTTACATGGGAAAATTGGAAGACGGGAAAGAAATAGCAGTCAAGAGGCTT
TCAAAAGCCTCGGGACAAGGGCTGGAGGAGTTCATGAATGAAGTGTTGGTGATCTCGAAA
GTCCAACATAGAAACCTTGTTAGACTTTTGGGATGTTGCGTTGATAAAGAGGAGAAGATG
TTGATTTATGAATATATGCCCAAGAAAAGCTTGGATGTGTTTCTCTTTGATGAAGGCCAC
CGAGGCATTTTGGATTGGAGAAAACGTTCCACTATAATCGAAGGGGTTGGTCGAGGACTC
CTTTATCTTCACAGAGATTCAAGATTGAAGATAATTCATAGAGATCTGAAGCCAAGTAAC
ATTTTGCTCGATAATGACTTCAATCCAAAGATTTCAGATTTTGGCATGGCTAGGATTTTC
GGATCTGACCAAGATCAAGCAGACACAAGGAGAGTAGTTGGTACTTATGGATACATGGCC
CCTGAATATGCAATGAAAGGAAGATTCTCTGAGAAATCGGACGTTTTCAGCTTTGGAGTT
CTAGTGTTAGAGATCATCAGTGGCCGAAAAAGTACAAGTTCTTGGAATGAGACATCCTCT
TTTAGCCTTTTCGGATATGCATGGATGTTATGGAAAGAACAAGATTTATCAACTTTTATC
GATCCATTCATATTGAACACGAGCTCGGAAATGGAGATCAGAAAATGCATACAGATTGGT
TTACTATGTGTTCAAGAATTTGCTGAAGACAGACCAAGTATTTCATCTGTTCTTGCTATG
CTTACCAGTGAAACTACAAGTCTTCCTGCACCATCACAACCTGCTTTTACTGAAAGACAT
GATTGTATCTTCAAAATGTGCAATGTAACTAATTGTACTTTGAACAATATCAGTATCACA
AACATAACTGGTAGATGACATGAGTATATGAAATTATTATTTTT
