Microarray Probes on PGSC0003DMT400075158
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52543_PI426222305 |
JHI_St_60k_v1 |
GAAGGCAAAGAAATCTTGTGAGTGGTTTCCCTTGTAAAGGGTAATATAAACATTGTTCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075158
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075158 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35160.1 |
+1 |
1e-71 |
233 |
144/381 (38%) |
O-methyltransferase family protein | chr4:16730989-16732808 REVERSE LENGTH=382 |
Transcript Sequence (1270 bp)
>PGSC0003DMT400075158 1270 pgsc_dm_v3.4
ATTTCATAGTCACAACATTACACATCTCAAAGAAAAAATCTCACAAAAATGGCATTGCAT
AATAAGATTGGAGACGAAACTAATGAAGTCCTCGCTGCTCAAGCACACATATTGAACCAT
GTGTTGAATTACGTCAATTCTATGTCACTCAAATGTGCAATTCAGCTCGGAATTCCAGAT
ATCATTCATAGCCATGGCCGAGCCATGACCCGATCCGATTTAGTGAATGCTCTCCCTATC
AACAAATCAAAAGGTCACGAATGTATTTATCGTCTCATGCGTATTCTAATCCATACTGGC
TTTTTTATTGAAGGAGAAGAAGGTTATTTACTTACTCCAACTTCGCGTCTTCTCCTTAAA
AATGAGCCGTTGAATCTAGCCCCGTTTGTTCAAGCGCACTTGGATCCGATTTTAATGGAT
CCATGGCACTCACTCGGTGAATGGTTCGCGAATGGGGACTCTACCCCATTCGCGACTGCT
CATGGGAAGCCGTTGTTTGATTATGCAGGTGATGACCCGAGGCTTAACCGTATATTCAAC
GAAGCTATGGAAAGTGATGCACGGTTGATCATGAGTGTGTTGATTAAAAATGGTAAGCGA
GTTTTTGAAGGATTGACATCGTTGGTGGACGTTGGAGGTGGCATTGGAACTGTGGCTAAA
GCCATTTCTAATGCTTTTCCAGAGTTGAAATGCTCTGTTTTCGATCTGCCCCATGTGGTT
GAAGGCTTGGAAGGGGGCAACAACTTGAGCTATATTACTGGAGACATGTTTAAGTCCGTT
CCTTCTGCCGATGCAATTTTACTTAAGTGGATATTACATGATTGGAGCGACGAAGACTGT
GCTAAGATACTGAAAAAATGCAAAGAAGCAATTCCGAGCAAGGAGAATGGAGGAAAGGTG
ATTGTGATTGACACTGTGATTGATAATCAGAAAGGAGATGACAAATCATTTGAAACTCAG
TTGTTTTTGGATGTGCTGATGATGGTTCACGTTTCTGGAAAAGAAAGAAATGAACAAGAA
TGGGCAAAACTCTTCTCTGATGCTGGATTTAGTGACTACAAGATTAGTCCTATCTTGGGA
TTAAGGTCTGTTATTGAGGTTTACCCTTAATATAGAGTTGGTCAAATATAATGTTAGCTG
AGTGATGCATTTTGAATATATAGAATAAGGTAATATTAGAAGGCAAAGAAATCTTGTGAG
TGGTTTCCCTTGTAAAGGGTAATATAAACATTGTTCTTTTTTTTTATATGGTAATAAAGG
AGACTTTTAT
