Microarray Probes on PGSC0003DMT400075155
Probe ID | Chip | Probe Sequence |
---|
CUST_52217_PI426222305 |
JHI_St_60k_v1 |
GGTTGTTCAATTCATCATCTCTCAAGTTTTCATGTGTTCGCAACAACAATTTATCTGTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075155
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075155 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G19180.1 |
+3 |
6e-35 |
129 |
95/223 (43%) |
jasmonate-zim-domain protein 1 | chr1:6622312-6623271 FORWARD LENGTH=253 |
Transcript Sequence (963 bp)
>PGSC0003DMT400075155 963 pgsc_dm_v3.4
CTATAATCCTTCAACTTTACTTTTCATTTCATTCAAAAAAGAAAGAAGAAAAAATAGTAC
TATTACAAATGGCTTCATCGGAGATTGTGGATTCCGGGAGACATGCCGGTCAGAAATCGC
ATTTCTCTCATACATGTAATTTGTTGAGCCAATACTTGAAGGAGAAGAAAGGTTCTTTAG
GAGATCTCAGCCTTGATATACATCGCAATTTTGATTCAACTGGTTCTACTACTATGGATT
TGTTGCCAATGATTGAGAAATCTGGTGAGTCGGTTCAGAAATCGATGAATCTGTTCCGTC
AAGGTGCAATGAAGGCTGAATCGGAACCGGAAAAGGCACAGATGACGATATTCTATGCAG
GTCAAGTTATTGTGTTTAATGATTTTCCGGCAGATAAAGCTAAGGAAATCATGCTTATGG
CTAGTACTAGCAAGGGAAACAACACACATAAACAATTGGAATCTGGTGCCGATTTGGTTG
TTCCCAGTTTCGGAAAAACTTCGATCCAGGAAAATCAAATGCCTAACCAGCCAATTGTTT
CTGATTTACCAATTGCGAGAAGAGCATCACTAACAAGGTTTTTGGAGAAGAGAAAAGATA
GGCTGACTGCAAAAGTACCTTACTATAGAGAGGAAGCAGCTCCTAAGAAGGAAGAAAACA
AGGCGGCATGGCTGGGATTGGGTGGTCAATTTGCAGTGAAAACTGAGCAATACTAGTGGC
TTTAATTGCTTAGTAGAAGCCTAGATAATCAATTACTACAAGTTTAATCTTGGCTTCAAC
CCTCATTGAACTCCATACTTAGATCTGACTATTATTATTATTATTATGATTTCTGTAATT
AAAACCAGATATGGTTGTTCAATTCATCATCTCTCAAGTTTTCATGTGTTCGCAACAACA
ATTTATCTGTCTATACTGTTTTCTTTTATGTTGCTTTGCTTTGATTGGAGATGAGAATAT
TAG