Microarray Probes on PGSC0003DMT400075154
Probe ID | Chip | Probe Sequence |
---|
CUST_52214_PI426222305 |
JHI_St_60k_v1 |
CAGCCAATTGTTTCTGGTAATAGTTTTCCCCTTTTGAGTGTCTGTCTGTTCTTCCTTGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075154
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075154 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G74950.1 |
+3 |
2e-22 |
76 |
65/186 (35%) |
TIFY domain/Divergent CCT motif family protein | chr1:28148919-28150258 REVERSE LENGTH=249 |
Transcript Sequence (1057 bp)
>PGSC0003DMT400075154 1057 pgsc_dm_v3.4
CTATAATCCTTCAACTTTACTTTTCATTTCATTCAAAAAAGAAAGAAGAAAAAATAGTAC
TATTACAAATGGCTTCATCGGAGATTGTGGATTCCGGGAGACATGCCGGTCAGAAATCGC
ATTTCTCTCATACATGTAATTTGTTGAGCCAATACTTGAAGGAGAAGAAAGGTTCTTTAG
GAGATCTCAGCCTTGATATACATCGCAATTTTGATTCAACTGGTTCTACTACTATGGATT
TGTTGCCAATGATTGAGAAATCTGGTGAGTCGGTTCAGAAATCGATGAATCTGTTCCGTC
AAGGTGCAATGAAGGCTGAATCGGAACCGGAAAAGGCACAGATGACGATATTCTATGCAG
GTCAAGTTATTGTGTTTAATGATTTTCCGGCAGATAAAGCTAAGGAAATCATGCTTATGG
CTAGTACTAGCAAGGGAAACAACACACATAAACAATTGGAATCTGGTGCCGATTTGGTTG
TTCCCAGTTTCGGAAAAACTTCGATCCAGGAAAATCAAATGCCTAACCAGCCAATTGTTT
CTGGTAATAGTTTTCCCCTTTTGAGTGTCTGTCTGTTCTTCCTTGTTTCTGTTTATTTAT
GAGATTCTCCTCTTTGTTCTGTTTTATTTTTTTGCAGATTTACCAATTGCGAGAAGAGCA
TCACTAACAAGGTTTTTGGAGAAGAGAAAAGATAGGCTGACTGCAAAAGTACCTTACTAT
AGAGAGGAAGCAGCTCCTAAGAAGGAAGAAAACAAGGCGGCATGGCTGGGATTGGGTGGT
CAATTTGCAGTGAAAACTGAGCAATACTAGTGGCTTTAATTGCTTAGTAGAAGCCTAGAT
AATCAATTACTACAAGTTTAATCTTGGCTTCAACCCTCATTGAACTCCATACTTAGATCT
GACTATTATTATTATTATTATGATTTCTGTAATTAAAACCAGATATGGTTGTTCAATTCA
TCATCTCTCAAGTTTTCATGTGTTCGCAACAACAATTTATCTGTCTATACTGTTTTCTTT
TATGTTGCTTTGCTTTGATTGGAGATGAGAATATTAG