Microarray Probes on PGSC0003DMT400075050
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49067_PI426222305 |
JHI_St_60k_v1 |
CTTATTGTTTTCGTCTGTGGTGTTGAATGTTTATACCCGTCGAAAATTCTTGTTTATGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075050
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075050 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G21220.1 |
+3 |
1e-41 |
139 |
72/101 (71%) |
SAUR-like auxin-responsive protein family | chr2:9089380-9089694 FORWARD LENGTH=104 |
Transcript Sequence (626 bp)
>PGSC0003DMT400075050 626 pgsc_dm_v3.4
GTTACCACCCACACAAAACATCCATAGCCCACATGCCTTTGTTCTTCCAATAAATACACC
TCTATCTTTCTAATTCTTTGCCAACACATAAATTAAACTATTCTACTATGGCTCTAAAGA
AAGCAACTCAAACAGCAACTCTTAAACAAATCTTGAAAAAATGTTCTAGCTTTGGAAAAA
ATGAAAATGGGCTACCAAATGATGTCCCAAAAGGACATTTTGTGGTATATGTGGGAGAAA
ATAGGAGTAGATATATTATTCCAATTTCTTGGTTGACTCATCCTGAATTTCAAAGTTTGC
TTCAAAGGGCTGAAGAAGAGTTTGGATTTAATCATGATTTGGGAATTACTATTCCTTGTC
ATGAACATGATTTCTGCTCTCTTATTTCTAACTTTTGATCGATCAGTCGGTGCACTAAAT
ATCTCGCTATGCACGGAATTCAAGAAGGGGAGAGGAGATCTAGCAAATCAAAGTGGATTT
GCTAAAAAAAATAAAATAATTGTGAATACTAGAAATTTTGTATATTGGTTTTCATGCACT
CTTATTGTTTTCGTCTGTGGTGTTGAATGTTTATACCCGTCGAAAATTCTTGTTTATGAG
AATCAATTAAATTCCAAAAATATTTC
