Microarray Probes on PGSC0003DMT400074952
Probe ID | Chip | Probe Sequence |
---|
CUST_26710_PI426222305 |
JHI_St_60k_v1 |
AACTTCAAATGTTTGTCTTGCCTTCATATTTCCAGGTGCAATTGCTCTAAGAGATGTCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074952
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400074952 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G56200.1 |
+1 |
2e-143 |
426 |
243/406 (60%) |
Transmembrane amino acid transporter family protein | chr3:20850087-20851779 FORWARD LENGTH=435 |
Transcript Sequence (1741 bp)
>PGSC0003DMT400074952 1741 pgsc_dm_v3.4
TTCAATCTCATAATACTATAAAGTTTAACAGTATTAAGTGAGGTCATTTGTCCCTTATTG
TTTCCTTGTAACATTTAAATATCTCTCAACCGTCACTTTTGCCGCCTGCCTCATCTCCGG
CCATAGACTAGCTTAATTATTTGTCAAATTGTAGCAGTTTTCGCGATTCAATCTCCGGGG
ATGGATCCAGTCAGGACTGGTACCAGCGCCGAGGTCCCACTGCTTTCGAATCAGAACTCT
CGGACGAGGGAGAACCGGTGGGTGATATGGAGGGCGGTGTTCAATGTGTCGACTACTATA
ATTGGTGCAGGAATTATGTCAATCCCAGCAACTTTAAAGGTCCTAGGTGTTGTTCCCGCA
TTCGTGTTGATTGTTCTGGTAGCTTTGTTAGTAGACATAACGGTAAATTTCATGTTGAGG
GCCACCTATGCTGGTCAGTCCACGACGTACGCTGGATTGATGAAAGAGAACTTTGGAAAG
ATCGGTTCTTTGGCAGTGCAAGTTTGTGTAATGATTACTACTCTTGGTTGCTTGATCATG
TATCTCATTATTATTGGAGACGTTTTTTCTGGAAAAGGAGAACACCTTGGTGTCCTTCAA
GAATGGTTTGGGATTCATTGGTGGAATTCTCGTTATCTATCGATCCTACTCACTGTCTTG
CTTGTTGTGCTTCCTCTGGTCCTATACCGCCGAGTAGAATCATTATGGCTCAGTTCAGCA
ATCGCAATTATCCTAGCAGTTGTATTTGTTGGTATATGTTCTGTAATGGCAATCATTGCA
ATCGTAAAAGGGCAAATAGTAAGGCCAAGAATGCTACCGGAGTTGAATAGTACTTCTTCC
TTCTTTAATCTCTTCACTGCCATCCCAGTCATTGTAACAGCTTTTGCATTTCACTTCAAT
GTCCATCCTATTGAAATTGAGCTGGGGATACCTGGAGCTATGACTAGTGCTGTCAAAATT
TCACTAGTAGTTTGTTCAGTCATCTATTTCTCAATTGGAATTTTTGGCTACCTTCTATTT
GGAGATTCAATCAATGCAGATATACTTGTAAATTTTGATACGTCGTCCTCTGGTGCTATA
GCAATCAGTCCCATTCTAAATGATATCGTTCGTTTGAGCTATGCACTTCACCTAATGTTG
GTATTTCCTCTCTTAAATTACTCCCTGAGAGCCAACATCGATGAACTCATATTCCCTAAG
AAGGAATTACTAGCAACTGACACCAAAAGATTCATGTTTCTTACACTGATCTTGTTAGCC
TTATCATATATAGTAGCCATAGCTATACCATCGGTATGGTACATTTACCAGTTCATGGGA
TCAACTTCAAATGTTTGTCTTGCCTTCATATTTCCAGGTGCAATTGCTCTAAGAGATGTC
CATGGTTTATCTTCAAGAAAAGACAAGATCATCGCGGTAGTCATGATTGTTCTAGCTGTT
GTGACGAGTGCTATAACTATCGCTGCCAACATCTACAATATGATTATTGGAAAAAGTTCA
TAAATTTATGCCATGAATCTCAATTAGACCTTTTGAATTTTCAATTTGTATTTGTGTTTT
GTTGTGCAATATTTGCTAGTTCCAATAATATCGTTGTGAATACAGAATTTAGCCATATTC
CTAAATCAATTGGACCAGAAAATTGACAATACTTCTTGAAGCAACGAGAGTGAGAACTAC
ATATTCTGTGTTAATCCCACAAAGTAGGGCGTGGGGAAGGTAAAATGTATGCAGATCTTA
C