Microarray Probes on PGSC0003DMT400074842
Probe ID | Chip | Probe Sequence |
---|
CUST_24988_PI426222305 |
JHI_St_60k_v1 |
ATTGGGAAAATCAGTCTGTTAGCGATGCCCATGTATTAATAGCTAAGGCATGACGAATCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074842
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400074842 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G67360.2 |
+1 |
1e-62 |
207 |
106/211 (50%) |
Rubber elongation factor protein (REF) | chr1:25237072-25237913 REVERSE LENGTH=240 |
Transcript Sequence (1493 bp)
>PGSC0003DMT400074842 1493 pgsc_dm_v3.4
AGGAATCCCTCCTGACCCCATACTTACGACACGTGGCATCTTCACAGCCCTTTGATTTTA
CTTAAATATTCCCCCACTTCCTTTATTACCCAACAAACTTTCTCATTTGCATCACCAATA
GCTGAGCAGATCAAACTTCCATACAAGCTGATCAACAACCAGCAAAATATGGCTACCAAC
AAGGCTGAGATGGAGAAAAGTGAGGTTAATTTGAAACATCTAGGGTTTGTAAGGGTATTG
GCTCTAAACACTGCGGTTTTGGTGTCAAATCTGTATGATTATGCGAAGCAGAACTCGGGG
CCTCTGAGATCAACTGTTGGTACAGTAGAAAACGCGGTAACCACCGTCGTAAGGCCTGTT
TACGAGAGATTTAAAGGTGTTCCTGATGAAGTCCTTGTTTTCCTAGACAAAAAGGTGGAT
GATGGAACAGCAAAATTTGATGAACGTGCTCCTCCGTTGGCCAAGAAGGTTGTCAGCAAA
ATCCAGTCTCTGTTTCAGAAGGCATCGGAGGTTGCACAAGACTTGTCCAAAGACATACAA
GAGGCTGGTCCTCGTGCAGCTATCTATCATGCTGGTGAATTGTCCAAGCAATTTGCTACT
AGTCGAGTGGCAGTGCTGTGGTTTTATGTCAATCACTGTCCACCATTGCACGGAATCGCA
CAGATGGCTGCTCCTACAGCTGCTAACTGGTCTGAAAAGTACAATCATTTTGTAGCTGAC
TTGCAGGAGAAGGGTTATAGTATCGTCAGCTATATCCCTTTGATACCTGTTGAAGAAATT
TCAAAGGCATATAAACAGGTTGAATCTGCTGCAACGAAGAAAGAAGGTGCTACTAACTCG
ACCTCAAGTAAATCTGAATGAGATTACAATCTCAGTATTACTGTTAAACCCAATGTTTCT
AATTGTGCTTGAAAGACTTACTTAAGTTTGGGTGGGATTAGGAAAGTCTGGGGATACCCA
TTGTATAAAGCCCTTCCTTTCTGTAGCACATCTGATATGTGAATGATTTTGTGCTTTGTG
TTCTTCTTGATTGTTTCCTTGCTGTAGTGGCGTGTCTATGCATAATGAAAGCTTGATTTT
GTCTAGTTTATGTTGGGGCATTCACTTTACTAATTTGATTAAGTCGTCACTGGTGAAGTG
TTACCCTTGCCCTGTGTTGAGTTCTTGCGAGACAAACGTATTCCCATGGAGTCTCTATGT
TAGTTGTTGCTTGCAGAAATGTCATCTCCTTTGCTACTGATAGCAACAGAAAATGCATTG
TTAAACCAATGACAATGGCGATTACATTTTTAAGTAATTTGAGTCCATTTGTGCTGTTAT
ACCAAGGATACAGCCTACATCAGGCTAGACACTGGATACCACATGAAATTTGGGCGTGGA
ATTTATCTTCGCTTGGTACTAGGTTGATGTGATTGCATATGTTAGAATAGGAAATTGGGA
AAATCAGTCTGTTAGCGATGCCCATGTATTAATAGCTAAGGCATGACGAATCC