Microarray Probes on PGSC0003DMT400074839
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25029_PI426222305 |
JHI_St_60k_v1 |
TGAAGCTTGTTACACCCTTGGCATGATTCGATTCTACTGTTTGCAAAATCGAGGAAGCGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074839
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400074839 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G67340.1 |
+1 |
5e-167 |
483 |
237/337 (70%) |
HCP-like superfamily protein with MYND-type zinc finger | chr1:25230323-25231622 FORWARD LENGTH=379 |
Transcript Sequence (1660 bp)
>PGSC0003DMT400074839 1660 pgsc_dm_v3.4
GTTTGTTTGTTTGTTTTACTTTACCCTTCTTTCTTTACTCTGTCTATCTTTGTTTGTGTG
TATAAAGGAATGAGAACAAGGAGAGGGTTTTGTTATCCAAATCCAAAAGTAAACATGTGT
ATAGAAAACAAAATTGTTAAGAGGAAAAGAAATGATTTTTCTGGCATCGGAGACCGTCGG
AAAAGATCTAAACTTTCGCCGGAGATTACTGGTCATCATCCTGATCTTTTTGATTCTTTG
CCTGATGATCTCGTTGTTTCTATTCTCTGCAAACTCACTTCTTCTGCTGCATCGCCGGCT
GATTTCGTTAACGTTTTGATTACATGCAAAAGACTAAATGGGTTAGGTCATCATTCGCTT
GTATTATCAAAAGCTTCTCAGAAAATGTTAACCGTGAAAGCACAAAACTGGTCGGAATCT
GCTCAACGCTTTCTCAAACAATGCGCCGACGCCGGAAATGTTGAAGCTTGTTACACCCTT
GGCATGATTCGATTCTACTGTTTGCAAAATCGAGGAAGCGGCGCGTCCTTGATGGCGAAG
GCGGCGATTAGCTCTCACGCGCCGTCGCTCTACTCTCTCGCCGTTATCCAGTTCAACGGC
AGCGGTGGTTCGAAGAACGACAAGGACCTCCGCGCCGGAGTTGCTCTGTGTGCACGCGCC
GCCTTCTTAGGCCACATCGATGCTTTGAGAGAGCTTGGTCACTGTCTTCAAGATGGGTAC
GGCGTGAAGCAAAACATAGCGGAAGGTCGGCGATTCCTCGTCCAAGCCAACGCGCGTGAG
CTTGCTGCCGTTTTATCGATGACGCCTTCAGCTCTGACCGCCGGCGGGTGGCTGACGTGG
AACCCGCTGCCTCATCACCGGCACGGAGCAGGTAGCGGGTGCCCGTTACTGAGTGATTTC
GGCTGTAATGTTCCTGCCCCGGAAGCCCACCCGGCTAATCAGTTTTTAACTGAATGGTTT
TTGAATTCTTCGAAAGGCGGAGTCCCGGGTTCCGGGCTCCGGCTTTGTTCACATGCGGGT
TGTGGAAGACCCGAAAGTAGGAGGCATGAATTCCGTCGATGCTCCGTTTGTGGTACAGTT
AACTATTGCTCACGCGCTTGCCAGGCGCTTGATTGGAAGATGCGTCATAAAGCAGAGTGT
ACACTGGTAGAGAGATGGATTGACGAAGACGGAGAAAATGACGGTAACGGTAACGGTGAC
GGCGAAATGGGTGAGGAGGATCAGAATATGGTGGAAAGTTAAACGGCGAGAGTAACAGTG
TGCTTGACTGTGAAGGTGACGGTAACGGCACGTGAGTCTCAAAAATTCACTGGCAGGTAA
AAAAAAAAAAGGAAGAAGGGCCAAGTTAGTGGCCGTTTTTGGGAATATAATTATGGTCTT
TATTTTTGTATAGAACAAGTAAAAAAAAAATTGGGATTGTATGAAGAGGAAAAAGGAGAA
AAGCAAATTATTCTGAAGTCTTTTTTTTGTTTTATTAATATTTTTTAAATAGGAGTATTA
ATTTAGAGTATGGTTGGAAAAAAAAATAGAAAATGAATGGGGAATATGATGATGGGTTCT
CTTTATGCTTGCCTCCCGACCAAATGATATCTCTATTCCTCATTCAACTTCTCTTTAAAT
TTACATGAAATGTGGGCCTATACATTTTACAGCTATTCAT
