Microarray Probes on PGSC0003DMT400074531
Probe ID | Chip | Probe Sequence |
---|
CUST_36343_PI426222305 |
JHI_St_60k_v1 |
GCTTCCGCTTTGGCCTTCTTCAGTTTTTATTGCAAAATAAGTGCTTTATTGTTGTTATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074531
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400074531 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G44380.1 |
+1 |
6e-34 |
127 |
67/171 (39%) |
Cysteine/Histidine-rich C1 domain family protein | chr2:18323590-18324333 REVERSE LENGTH=247 |
Transcript Sequence (1048 bp)
>PGSC0003DMT400074531 1048 pgsc_dm_v3.4
AGCTAACTCTCCATTATAGTACTGCACAACAAAATTACAAGAAAAAAAATGGGAAGACAA
AACCGGGGTACAAATGCGGGACCTCAAGATAAACAACACTTCAGTCATTCTCACATCTTG
AAACTAATTATGAATCCAACTGAAACTCTCAATTGCAATGCCTGTGAGAAACCAAACAAT
AGTCACACGCCTTTCTACGGCTGCAACACCTGCCAATATTTCCTCCACGATAACTGTTTC
AATGCTCCGCGTTTTATCAATCACTCGTCTCATCCTTCCCACCCCTTGACCCTTCACCAA
ATTCCGTCTTACTCGAGTCGTTCCTATACTTGCAAGGCTTGTGGCTCTGCTGGTAATGGA
TTTTGTTTTAGCTGTGCTGCTTGTGAATTTGATATTCACTTGCAATGTGCGTCCAGTCCT
AGCTCCATACTTGTTAATAGCCACCTGCATCAATTGGAGCTCCACTTCGGTTCTCCATAC
GAAGATAAGAATATCAAATACAATTGTGATATGTGCAATGTGATAATGAACAGGGACGAT
TGGTTGTACTACTGTGCTGGGTGTGATTTCGGGTCACACTTGCACTGTGCAATAACTAGT
CCTGAAGTCGGTGTTTTCCCCAAACAGCACCGTCCAATTCCAAATTCAAATTCAAATTCA
AATCCAAATCCAAATCCAAGTCAGAATTCAAATTCAAGTTGGAATTCCCATGCCAATGAG
GCGGTGGAAATGATAAATTCAGTGAATGATGATCATGACCGGCTTATAGCAGCTCAAATT
CGCGCTCAGATCGAGGCACGAGGAAGACGTGCTATGCTGGATTCGATCTAGGCGTACAAT
TACATATATCTAATGCTTCCGCTTTGGCCTTCTTCAGTTTTTATTGCAAAATAAGTGCTT
TATTGTTGTTATGTTATTCCTCTTCCAAATTTTGTATCCTTGATAATCATGTTTCTCCAT
TTTAATTTTTGTTTCTATGTTTATTTATTACAAAATAGTGTTTGATTTCCCCCTTTTTGT
TCTCCAAAATAACTGTCTTTGGCATAAT