Microarray Probes on PGSC0003DMT400074356
Probe ID | Chip | Probe Sequence |
---|
CUST_38383_PI426222305 |
JHI_St_60k_v1 |
CTGGTCTCTAAGATATCTCCACCATTTCCTCTGTATAATTCGTCACTATCTCTTTTTCGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400074356
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400074356 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G24080.1 |
+1 |
0.0 |
660 |
331/470 (70%) |
Protein kinase superfamily protein | chr5:8139334-8141014 REVERSE LENGTH=470 |
Transcript Sequence (2634 bp)
>PGSC0003DMT400074356 2634 pgsc_dm_v3.4
TTTTGGCCATTTTGTGTCAATCCTCTAAATAGAAATTCCCCAGTCAGCAAAGATGCAATC
TTGGAGTTTGGCACCACAGGAAATCTCTTGTTGATGGATGGAGACACCACAGTGTGGGCA
TCAAACACCTCGGAAGCAGGCGTTGAGTTGGCTGTCATGTCTGAAAATGGCAACTTCATT
CTCTACAGCACCAATCTAAGTACCATTGCATGGCAAAGCTTTTCACATCCATCTGATACT
CTCTTGCCTGGTCAATCCTTAACAGTGTCACTAGAATTAACATCATCAAAATTACCTTCT
CATGGTGGTTACTACACTTTAAAAATGTTGCAGCAGCCTACTTCACTAAGTCTTGCATTG
ACCTATAATGTCCCCAACTACTACGATTCATCGCCTGAATTTTACAGCAATTTTTCTTAT
TGGTCAGGACCTGAAATATCAAATGTGACTGGAGATGTTACTGCAGTATTGGATAAAGCA
GGAAGCTTTGGTATAGTTTATGGCTCATCTTCAGATGGAGCAGTTTATGTATATAAAAAT
GATGGAGATTATGGAGGACTATCATCGGCTGTAAATCAAACGAATTCCAATGTTCCATCT
ATTCTTCGTCGATTAACCCTTGAGGTTAATGGAAATTTACGTTTGTATCGATGGGATAAT
GATGTGAATGGATCAAGGCAATGGGTTCCAGAGTGGGCAGCTGTGTCTAATCCATGTGAT
ATTTCTGGAGTTTGTGGCAATGGGATATGTAATTTAGACAGAAGCAAAACAAATGCTTCT
TGCACATGTTTGCCAGGGACTTCTACGGAGGGAGATGATGTTTCATGTTCGGGAAATCCT
TCAGTGACAGGGAAATGTGGACCTCAGCATGAAAATATGATGTCCCAGTTCAAGATTTCT
ACGGTTCAGAAAACGAATTATTATTTCTCAGAATCATCTGTTATAGGAAATTATAGCGAT
AAAGGGTCACTGTCCAAATGTGGTGATGCTTGCTTATCAAACTGTGGTTGTGTTGCATCT
GTTTATGGACTTAGTGAGGAAAAGGCTTATTGTTGGTTACTCAGGAGCTTGGAATTTGGT
GGATTTGAGGATCCTGTTTCGACCTTATTTGTGAAGGTTGAGGCCAATGCCTCGGTATCT
GAAAAACCTGGGAATTCATCAGATGAGTCGAAGAGTAGGCACGATAAGGTTTTGGTACTT
CCTATAGTCCTGAGTATGACTGTTCTCATTTTGCTTCTCTGTTGTTTATTGTATATCAAT
ATCCATAGGAGAAGATCTATGAGAAGGGCACTTGAGGGATCTTTGCTGTTGTCTGGAGCT
CCAATTAGCTTCAGCTACCGCGACCTGCAATGTTGGACTAACAATTTTTCCGAGTTACTT
GGAACAGGTGGATTTGGAAGTGTGTATAAAGGAAGTTTAAAGGATGCAACATTGATTGCA
GTAAAGAAACTTGATAAAGTTTCACCTCATGGGGAGAAGGAATTTATAACAGAGGTCAAA
ACCATTGGCTCTATGCATCATCTGAACTTGGTTCGTCTATGCGGTTACTGTTCTGAGGGA
ACCCAACGGCTACTAGTGTATGAGTACATGAAAAATAGCTCATTAGACAAGTGGATATTT
CATTCATTTAGTACAAGAAATAGACTACTGGATTGGGCGTCACGTTTTCGCATAGCAGTT
GGCACTGCACAAGGGATAGCCTATTTTCATGAGCAATGTAGGAACAGAATTATACATTGT
GATATCAAGCCAGAAAACATACTTCTGGATGAGAATTTCTGCCCTAAAGTATCTGATTTT
GGACTAGCTAAGTTAATGGGAAGAGAGCACTCTCATGTTGTCACAATGATCCGAGGAACG
AGAGGTTATTTAGCTCCCGAGTGGGTCAGCAATCGACCTATCACTGTAAAAGCTGATGTT
TACAGCTATGGCATGCTTCTTCTAGAGATCATTGGTGGTCGGAGAAATCTTGATATGACT
TGTGATGCAGATGACTTCTTTTATCCTGGATGGGCTTACAAGGAGATGACTAGTGGAACA
CCCGTAAAAGTTGTAGATAGGCGACTTAGAGGAGCAGTAGAGGAAAAAGAGGTAACGAGA
GCACTGATGGTCGCCTTCTGGTGTATTCAGGATGAAGTGTCAAACAGGCCTTCCATGGGA
GAAGTGGTGAAGATGTTGGAAGGATCAGTTGACATGAATATGCCACCAATGCCACAGACA
GTTTTGGAGTTAATAGAGGAAGGCTTAGATCAAGTATACAAGGCAATGAAGAGGGAACTC
AATCAGTACAGTTCTTTCTCCATTGCTACTCATCCATCATCTAATGCTACATGCAGTCAC
TCCAGTATGTCACCTAGATAGTTGAAGGTGAAATCGAACACAGTTTTTCCTAGGATTAAG
TAATCGTATCATCATTGATTATTCATTCCCCGTCTCCCAAAAGAAGTCCCGGAAAAAGAA
TAAGAAGGGAACACAACCACTTTTGTATCATGTGTTGCTACAACACCATACACGTTGCAA
GAACTCACTGTCTTGTTTTATTGTTTAATTTCACTCAATTCCTCTGGTCTCTAAGATATC
TCCACCATTTCCTCTGTATAATTCGTCACTATCTCTTTTTCGGTTTCTTTTATA