Microarray Probes on PGSC0003DMT400073395
Probe ID | Chip | Probe Sequence |
---|
CUST_31493_PI426222305 |
JHI_St_60k_v1 |
GAGTTGGCTAGATTGAGACTGAATTGTCCTTGAAACATTTAAGTTGTTGAATTTGACAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073395
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073395 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G80840.1 |
+3 |
2e-32 |
88 |
57/126 (45%) |
WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302 |
Transcript Sequence (1691 bp)
>PGSC0003DMT400073395 1691 pgsc_dm_v3.4
AGATTAGTGGGATTTCACTTGTTGTATGTTGTTGGTATTGATGTTTGTTTCTTTTTTGGT
TTCAGAAACAAGAAGTGCAGAGTGATTTCACTGGATTGAGCAGAGAAAGAGAGAATATGG
GGGTGAAAAATGAGGCAGGGGATTTGTTAGAGGAACTAAACAGAGTGAGCAGTGAAAACA
AGAAGTTAACAGAGATGCTCACTGTAGTTTGTGAAAATTACAATGCTTTAAGAAACCAAA
TGATGGAGTATATGAGCACACAAAATGGTGTAGCAGAAGATAGTAGTGCAGGGTCAAGGA
AAAGAAAAGCTGAAAGTATCTCCAATATCTCTAATCCTGTTAACAATAATAATAACAATA
TGGATGTTGTTCATGGACGTTCATCAGAAAGCAGCTCAAGTGATGAAGAGTCTTGTTGCA
AGAAACTCAGAGAGGAGCACATTAAAGCGAAAGTTACAATTGTTTCTATGAAGACTGATG
CATCTGATACCTCTCTTGTAAGTACACACTCTTATGAGAATGACACTTTAGAGTTATTTG
TATCTCAGGTAAAAGTTTAAGCTGTTAGTGAGAGCATATGACTAATTATGTCTGTGAACT
TATTTGCAGATTGTAAAGGATGGTTATCAGTGGAGAAAGTATGGTCAGAAAGTAACCAGA
GACAACCCTTGTCCAAGAGCTTACTTCAGATGCTCATTTGCACCTGGTTGCCCTGTCAAG
AAGAAGGTAAATTAAAACCCTAATTTATGAGTGTTGACAATCATAGAAAAGAATGAATTT
GCCATGTTCGTGTTCAAGTCAGTTTGCGCGCATATTCTAATAGTGCATTTGGCATTTTTG
ACAGGTTCAGAGAAGCATAGAAGATCAGTCTATTGTGGTAGCAACATATGAAGGAGAACA
TAACCATCCACAAACCTCAAAACCAGAATTAGGTGCAAGTACTAATACTTCCACTGCCAG
CCGATTAAATGTGACAACTATCGCCGGTACTACTACTTCAGTACCTTGTTCTACAACTCT
CAATTCCTCAGGACCAACCATTACTCTCGATCTTACTGCACCGAAAACAATAGAAAAACG
CGATATGAAGATGAATCACAGTACTACTAGTCCTATTGGTGCCAATAGCATTAGAACAAC
AACAACAACAGGAGGTGAATATCAAAATAGGCCAGAGTTTCAACAGTTCTTGATAGAGCA
AATGGCTACTTCATTGACCAAAGATCCAAGTTTCAAAGCAGCACTTGCAGCCGCCATATC
AGGAAAAATCCTCCAACATAATAATCAGACAGGGAGATGGTAAACAAAAGTCCAGTAGAG
CAGTCAACTACTTTGTATAGACAATTGTTCAATATTTTCCAACTTGACTCATATGAAAAG
TTCTTAGGAGGAAAAAGGAAACACAAATTATTGTCCAAATGCAAATACAGGAAAAGTTAG
TAATATTTGGACCGCAAAGTTGGACTTGGAAGTGCACGTGAGAATGGGATCTTGCTGGAC
TGTGAGAAATTTTCAACAGCAGCCATATTGGGTCCCCTGCAGAATGGACTTGCTCTGAGT
TGGCTAGATTGAGACTGAATTGTCCTTGAAACATTTAAGTTGTTGAATTTGACAACTTTG
TAGAATACTGAAATGAGATTATGAAATATACAACTTATTGTTCTGTTCACTGACTTTATG
CAACTCTTTTG