Microarray Probes on PGSC0003DMT400073395

Probe IDChipProbe Sequence
CUST_31493_PI426222305 JHI_St_60k_v1 GAGTTGGCTAGATTGAGACTGAATTGTCCTTGAAACATTTAAGTTGTTGAATTTGACAAC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073395

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400073395 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G80840.1 +3 2e-32 88 57/126 (45%) WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302

Transcript Sequence (1691 bp)

>PGSC0003DMT400073395 1691 pgsc_dm_v3.4
AGATTAGTGGGATTTCACTTGTTGTATGTTGTTGGTATTGATGTTTGTTTCTTTTTTGGT
TTCAGAAACAAGAAGTGCAGAGTGATTTCACTGGATTGAGCAGAGAAAGAGAGAATATGG
GGGTGAAAAATGAGGCAGGGGATTTGTTAGAGGAACTAAACAGAGTGAGCAGTGAAAACA
AGAAGTTAACAGAGATGCTCACTGTAGTTTGTGAAAATTACAATGCTTTAAGAAACCAAA
TGATGGAGTATATGAGCACACAAAATGGTGTAGCAGAAGATAGTAGTGCAGGGTCAAGGA
AAAGAAAAGCTGAAAGTATCTCCAATATCTCTAATCCTGTTAACAATAATAATAACAATA
TGGATGTTGTTCATGGACGTTCATCAGAAAGCAGCTCAAGTGATGAAGAGTCTTGTTGCA
AGAAACTCAGAGAGGAGCACATTAAAGCGAAAGTTACAATTGTTTCTATGAAGACTGATG
CATCTGATACCTCTCTTGTAAGTACACACTCTTATGAGAATGACACTTTAGAGTTATTTG
TATCTCAGGTAAAAGTTTAAGCTGTTAGTGAGAGCATATGACTAATTATGTCTGTGAACT
TATTTGCAGATTGTAAAGGATGGTTATCAGTGGAGAAAGTATGGTCAGAAAGTAACCAGA
GACAACCCTTGTCCAAGAGCTTACTTCAGATGCTCATTTGCACCTGGTTGCCCTGTCAAG
AAGAAGGTAAATTAAAACCCTAATTTATGAGTGTTGACAATCATAGAAAAGAATGAATTT
GCCATGTTCGTGTTCAAGTCAGTTTGCGCGCATATTCTAATAGTGCATTTGGCATTTTTG
ACAGGTTCAGAGAAGCATAGAAGATCAGTCTATTGTGGTAGCAACATATGAAGGAGAACA
TAACCATCCACAAACCTCAAAACCAGAATTAGGTGCAAGTACTAATACTTCCACTGCCAG
CCGATTAAATGTGACAACTATCGCCGGTACTACTACTTCAGTACCTTGTTCTACAACTCT
CAATTCCTCAGGACCAACCATTACTCTCGATCTTACTGCACCGAAAACAATAGAAAAACG
CGATATGAAGATGAATCACAGTACTACTAGTCCTATTGGTGCCAATAGCATTAGAACAAC
AACAACAACAGGAGGTGAATATCAAAATAGGCCAGAGTTTCAACAGTTCTTGATAGAGCA
AATGGCTACTTCATTGACCAAAGATCCAAGTTTCAAAGCAGCACTTGCAGCCGCCATATC
AGGAAAAATCCTCCAACATAATAATCAGACAGGGAGATGGTAAACAAAAGTCCAGTAGAG
CAGTCAACTACTTTGTATAGACAATTGTTCAATATTTTCCAACTTGACTCATATGAAAAG
TTCTTAGGAGGAAAAAGGAAACACAAATTATTGTCCAAATGCAAATACAGGAAAAGTTAG
TAATATTTGGACCGCAAAGTTGGACTTGGAAGTGCACGTGAGAATGGGATCTTGCTGGAC
TGTGAGAAATTTTCAACAGCAGCCATATTGGGTCCCCTGCAGAATGGACTTGCTCTGAGT
TGGCTAGATTGAGACTGAATTGTCCTTGAAACATTTAAGTTGTTGAATTTGACAACTTTG
TAGAATACTGAAATGAGATTATGAAATATACAACTTATTGTTCTGTTCACTGACTTTATG
CAACTCTTTTG