Microarray Probes on PGSC0003DMT400073342

Probe IDChipProbe Sequence
CUST_31490_PI426222305 JHI_St_60k_v1 GAACGCGAACAAGAGTTGGAGAAACTTGGATCAGCTCTATCTTCTTGGGGATGTTTTCAG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073342

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Source Transcript PGSC0003DMT400073342 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G49390.1 +2 4e-102 314 148/288 (51%) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:18279600-18280873 FORWARD LENGTH=348

Transcript Sequence (1567 bp)

>PGSC0003DMT400073342 1567 pgsc_dm_v3.4
AAATTTTAAAAGTGTCTAGATTATCATTTTGTAAGTTGGAGTGTTCAACAGACAGAGTGG
AGACAAGTTGAGGTATCTAGATGTCCACTCTCAAAGTTGGATGCTTACTTGCCAACTAAG
GCCAAATTAAGTGTCTGTATTATGCCTACATATAATGCTATCACTCTGGAACCTGAACTT
CTAATTGGAAACCCATTGGATAGTGTTACTTGATCATAGCATAAGCATGGCTGCATATTC
AGTTCCACCTGTAGAGGAGTTGCTGTCAAAAAGAGTTCAAGAAATGGTCCTTCATGGGGA
GGAGCCACTAGGACCTTATATTTGCAGAAGTGGTGACGATGTTGATGAAAAAGAAGACAT
CATGGATACTTCTCCAATTCCTATAATTGATCTAAACCTCCTGTCTTCTTCAACAACATC
AGATAACGAACGCGAACAAGAGTTGGAGAAACTTGGATCAGCTCTATCTTCTTGGGGATG
TTTTCAGGGAATAGCACATGGGATTTCAGCTTCTTTACTGGACAAAATCCGCCAAGTTTC
AAGGGAATTCTTCAACCAGCCAATGGAAGAGAAGAACAGGTATGCTAAATCAGTTGTTGA
TTTCCAAGGTTATGGAGCTGATCCTGTTCCAGAACAAGGTCAGTCCCTTGATTGGTCTGA
TCGTCTCTTCCTCGAGGTGTTCCCTGAAGATGGAAGACAGTATAACCTCTGGCCACAAAT
CCCAATATCATTCAGAGAGGTCTTAGAAGATTATTCTGAGAAAATGAAAATGGTCACAGA
AATTACCTCTAAAGCTATGGCAAAGTCGTTGAAGCTGGAAGAAAAGTGCTTCTTGGAACA
ATTTGGAAAACAAGCACAACTGCATGCGCGGTTTAACTACTACTCGCCATGTCAGAGGCC
TGATCTGGTTCTTGGCTTAAAACCCCATGCTGATGGAACAGGATACACTATTATTCTGCA
AGATGAAGTAGGACTCCAAGTGCTTAAGGATGGCAAATGGTATACAGTACCAAAAAATCC
TACAGCTCTGCTTGTTCTCATGGGTGATCAAATGGAGGTAATGAGCAATGGAATATTCAA
GGGCCTGGTGCATATGGTAGTGAGTAATTCAGAGAGGGATAGAATTTCTGTCGCAATGTT
CTACACACCTGAATTAGGGAAAGAAATCGGACCAGAAGATGACTTAGTAAATATGGACAG
ACCAAGGATATACAAGAAAGTGACAGATTATGCAGAAACTCACTGGAAGTTTTACCAGCG
TGGTTTGAGAGCACTACACACTGCACACATTTAGTACTACTATATATGTCTTCCACTGTT
TTCTTTATGCTGTAGCGCGAAGAAGTTTTGGAGAGAGGTGATGAGATGCAGGTTCAGGTT
ACCGAGTAGATGACCCTAGATAGTAGGGTGTGGAGGACACGTATTAGAGTAGAAGAGTAG
TAGGTAGTATAGTATTGTCTTGTTTAGGGTGGCTAGTGTTTGTGATGGTACTAGTTGTTT
ATTTTTTTAATAATATATCCTAGTATATTGTTTATGATATTTCAATTATCACGTGATTTT
ATTGTTG