Microarray Probes on PGSC0003DMT400073121
Probe ID | Chip | Probe Sequence |
---|
CUST_34883_PI426222305 |
JHI_St_60k_v1 |
GCATACCTAGACTGTTTTCCTTTCTTGCTGCATAAGATTCTTTTCTGTAACACTAATGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073121
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073121 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G47570.1 |
+3 |
8e-105 |
339 |
200/512 (39%) |
Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010 |
Transcript Sequence (1520 bp)
>PGSC0003DMT400073121 1520 pgsc_dm_v3.4
AATTTTCAAATGGTATTCCAAGAGAAATTGGAGACATGCAAAATCTGATACACCTTTCTT
TGGCACAAAACAAGCTACAAGGATCTATACCTGACTCAATTGGTAGCATACCGAGTTTGG
AATTTCTAGACCTCTCGAATAACAATCTATCTGGATCAATTCCGATGTCCTTAGAGAAGC
TTCGGTATCTCAACTATTTCAATGTTTCCTTTAACAGCTTGCAGGGTGAAATTCCCTTTA
GTGGTCCTTTCAAGAACCTTTCCAGCCAGTCATTCATGTTCAATAAAGCCTTGTGTGGTG
CTCCAAGATTTCGTGTCCTCCCGTGCCCCACTTCTTCAAACCATAGATCAAAGAAGAAGA
AGTTACTTCTGATAGTCTTTCCTCTACTGGGAGCAGCTGTGATAATTGTTTTTGTAACAT
TGGCGTTTGTGTGGATGAGGTACAGAAGAGAAGGAAATGTTCCAATTGAAGCTGATTTGT
TAGCTACAATGGAAAGAATTTCATACTATGAAATCATACAAGCCACTAATGATTTTAGTG
AGAGTAATTTCATTGGTTCGGGGAGTTTTGGTTCTGTTTACAAAGGAATTCTCAGAGATG
GGACTACCATTGCAGTTAAAGTGTTCAACCTACAAGCTGAAGGTGCATTCAAGAGTTTTG
AAACAGAATGTGAAGTTCTTCGCAACCTTCGCCATAGGAATCTCACCAAAGTCATTAGCA
GTTGCTCCAACCTTGATTTCAAGGCTTTAGTGCTCGAGTACATGCCTAATGGGAGCCTTG
AAAAGTGGTTGTATTCACACAACTACTTCTTAGACATCCTGCATAGACTAAGCATAATGA
TAGATGTGGCATGTGCATTGGAATATCTCCACAATGGTTGCTCAGCACCTGTGATTCATT
GTGATCTGAAGCCTAGCAATGTCTTGCTAGATGAAAACATGGTCGCTCATGTAAGTGACT
TTGGCATTTCTAAACTACTCAGTGAAGATGAGAGTGATTTACACACTAAAACCTTAGCAA
CATTCGGCTACATTGCACCAGAGTATGGAAGGGAAGGATTGGTGTCGCCAAAATGTGATG
TTTATAGTTATGGGATCATGCTGATGGAAACATTTACGAGGAGAAGGCCTAACGATGAAA
TATTTGATGGAGATCTTAGTTTAAAGAAATGGGTGAGTGATTCACTCCCAGAGGCAACAA
TCAAAGTTGTAGATGCGAATTTGCTAACGCCAGAAGATGAAAAATTCATGGACAAGATAG
ATTGTGTAGCATCCATCATGAAAGTGGCACTGGATTGCTCTGCAGAATCTCCTGAAGAAA
GGATCAACATGAAAGATGTTGTAGGAATACTACAAAAGATCAAGATTCAACTTCTTTCAT
GTTCTGCAAGTACATAAAAACATTTGATTCATGTCACTTGAGGGTATAGAAAGTGTTTGT
TAACTTTTTAGCTGCATACCTAGACTGTTTTCCTTTCTTGCTGCATAAGATTCTTTTCTG
TAACACTAATGTAATATCGG