Microarray Probes on PGSC0003DMT400073070
Probe ID | Chip | Probe Sequence |
---|
CUST_34871_PI426222305 |
JHI_St_60k_v1 |
TTAGGCAGCTTGTGTTTTGCCTTTCGGTTTGTTGTCATGTTATTATTTATGCCATCGATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400073070
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400073070 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G34250.1 |
+3 |
0.0 |
860 |
430/474 (91%) |
SecY protein transport family protein | chr2:14462635-14464572 FORWARD LENGTH=475 |
Transcript Sequence (1971 bp)
>PGSC0003DMT400073070 1971 pgsc_dm_v3.4
CCCACTTGGCGTCACGCGTTCTCCATCTCTGTTAACTGGTGACGCTTACACATAAATCCG
TCAGATCCGCCCCTTCTCTCCCTATCCTCTCTCTCATGGTCAAAACCCTACAAATAGAAG
CATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTG
CTTCTAGATAATTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTG
TGAAACCATTTCTCTCATTCCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCA
AAGAGAAGGTCATCTATACTGTAATTGCTCTTGCTATTTTTCTGGTTTGCAGTCAGCTCC
CTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTC
TTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAA
TGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTCCGTGAGG
ACCGAGCACTCCTTAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGG
CAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATG
CTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAAC
TTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCT
GTGAAAGCATTATCTGGAAAGCATTCAGTCCCACAACCATCAATACCGGGCGTGGTGCTG
AATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTAGTAGATCAAATAAGATTA
GTGCCCTGCGCGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAA
CTGTGTTGATCTTCCTCATTGTTATCTACTTTCAAGGATTCCGTGTAGTTTTACCTGTTA
GATCTAAGAATGCTCGCGGACAGCAAGGTTCTTACCCAATCAAACTCTTCTACACCTCAA
ACATGCCTATTATTCTGCAGTCTGCACTTGTCTCCAACCTGTATTTCATCTCTCAGTTGC
TCTACAGGAGATATGGAGGAAATTTCATCGTGGATATGATAGGAACTTGGAAAGAATCTG
AATATTCTGGACAATCTGTTCCTGTTGCTGGTCTTGCTTACCTTGTCACTGCGCCGTCAA
GCTTGGCAGACATGGTGTCACATCCGTTCCACGCTCTTTTCTATATAGTGTTCATGTTAT
CAGCCTGTGCCCTGTTCTCAAAGACCTGGATTGAAGTTTCTGGATCATCTGCCAGAGATG
TTGCCAAGCAGCTTAAGGAGCAACAAATGGTGATGCCTGGTCATCGTGATTCCAACCTGC
AGAAGGAATTAAATCGTTACATACCTACTGCAGCTGCCTTTGGAGGAGTTTGCATTGGTG
CATTGACAGTTTTGGCAGACTTGATGGGAGCGATTGGATCAGGAACTGGAATCCTTCTTG
CAGTCACAATCATTTACCAGTATTTTGAGACATTCGAGAAGGAGAAGGCCACTGAACTAG
GCATGTTTGGTTTGTAGGCTGTAGCGTTTATGCTAGTTTGTCCCTCCTTCAAGCCAAGAG
AGCAATGTAACTGTTAACTTGTTGGCTTATAATGGATAGATATTAGAGGCCACGAGTTTT
TCCTGTTAAATTTTGTAAGTTTTTGTTGTTTTTAACTGTGCTGATGAGCGCCTGAATGTT
TTACAAGACAAGACTAGGTTAATTTACAGAAATTCTCAAAGGATGTTACTTGACCTCTCT
CCTGATTCCCCTCCATAATGTGATTGATACAAGCATTGAGCACAAACAAGCTTAGGCAGC
TTGTGTTTTGCCTTTCGGTTTGTTGTCATGTTATTATTTATGCCATCGATT