Microarray Probes on PGSC0003DMT400072972
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19329_PI426222305 |
JHI_St_60k_v1 |
CTAATGAGGAAGATGGGAACAAAACAGATTATCTTAAGATGGCTGGAAGTTTTTTCAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072972
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072972 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G03440.1 |
+1 |
1e-11 |
64 |
40/65 (62%) |
nodulin-related protein 1 | chr2:1039409-1039972 REVERSE LENGTH=187 |
Transcript Sequence (1656 bp)
>PGSC0003DMT400072972 1656 pgsc_dm_v3.4
ATGAATTTTCTCTCATCTTTGGCTAAGAGCGCCGGAGCCGGCGATGAGAAAAAAGCCGGC
GGCGAGGAATCTGGTTCCACAACAGAGCTTTTCGCCAGTGCTAAAGTGTTAGCAGATGCC
GCTCAAAGTCAATTCAACAAAGATTCCGGCAAAGTTGATAACAAAAAAGTAGCTGAAGCA
GCTGCCGATGTCCTCGACGCTGCACAGAAATATGGAAAATTAGACGAAACTCAAGGAATT
GGACAGTACGTTGAGAAAGCCGAAACTTATCTCCACCAGGCTCCGGCCGCCGCTCCGGTT
GCTGAAGAAGCAAAAGCAAAAGCACCCGCTCCTGCACCGGAATCGGCTCCGGCATCGGAA
CCAGCACCGGCGCCGGTTGTTGAAGAAGATAAGGAGGAGGAAAAAAAGAGTGGAGGAGCT
GATTATCTTAAGATGGCTGGTGATTTCTTAGGCAAGAAGCCGTGCGGAGCCGGACGTGGT
GGTGGTAAGACGGCGGCAGGCAGTGCCGGCCGCGGTGCTCCTAACCCAAATGAGCACAAA
CAACCAACAACCTCTGAGCTAATGGCTAGCGCGAAGTTGGTGGCTGCAGCTGCACAGTCC
CAATTAGGTGGCGGCGGCGAGGGCAAGCCAAAAGAAGAATTGGACACCGGAAAGCTTGCT
GGAGCCGCCGCTGACCTCCTTGCGGCCGCTACCCATTACGGGAAACTAGGAGATGATGGA
ATCGGTAAGTATATCGGCCAAGCTGAGGATTATCTCCATGGCTACGAGCTTAAGAATGTG
AAACCCAACAAAGCTGGTGCTGGTGCTAGTGTTGGATCCAAAAAAAGTACTTCTAGTAAT
GCGGAGAGCAAGAACTCATCGGAGTCCCTCCCACGGGGCAATGCAAGAGATGATGATGAG
CGCGGAGAGCATGCCAGGAAAGAGAAGAAGATACCATCAAAGAAACAATCCGGTGACAAT
TACGGTCATGATCGTGAGGAAGGTGATGAAGATCATGCTAGAGGCCACGACGAACATATG
CCAAAGGGTAAAGAGATGCCTAAGAAACAAGTTGGTGACCGTCATGGACATGAACATGAA
CGTTCAAAGGAAGGTGATGATCATTCCGGAGATGAGTATGGCGAGCACACAAGGAAAGGT
AAGGGAATGCCTAGGAAACAATCTGGTGATCGTGACAACCGTGAACGTTCAAAGGAAGAT
GATGATCACTCGAGATCTGGACGTGGTGAAAGTAAAGGAATGCCCACGAAAAAATCTGGG
GGTCATGGACATGATGAACATTCAGATGAAGATGATAGTCGCTCTGGAGGGGGGTATGGC
GATTACATCAAAAAAGCTCAAGGAATGATCAAGAAAAAATCTGGAGATGATGATAATCCA
GAGAAAGGTGATGGTGAATCTGGTGGAGGGTATGGCGATTATATCAAAAAAGCTCAAGGA
TTTCTCAAGAAAAAGTCGGACAACGGTGATGGAAGTCCAAGGGGTGAGGATGGAGATTCT
GGAGGTGGGATGGGTGGGGTCATGAAAATGGCTCAAGGTATGTTCAAGAAAGATTCCGAC
GATCGTGATGGAAATCGTAGCCCCACCAAACATTCTAATGAGGAAGATGGGAACAAAACA
GATTATCTTAAGATGGCTGGAAGTTTTTTCAAGTAA
