Microarray Probes on PGSC0003DMT400072921
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19416_PI426222305 |
JHI_St_60k_v1 |
TAAGCAGCCTACCTTGATGCAATTGTTAAAGACAGAATCCATGGCTCAAACCCGTGAGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072921
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072921 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G60980.2 |
+1 |
4e-31 |
126 |
101/320 (32%) |
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:24543988-24546027 FORWARD LENGTH=460 |
Transcript Sequence (1899 bp)
>PGSC0003DMT400072921 1899 pgsc_dm_v3.4
ATGGCTACTAAATCAACAAGACATGCTGCTGACAAAGTTGCCACTGCTTTTGTGGTTCAA
TACTATAACATTTTACAAACCCTAATCGACCAATCGTATCGATTTTACAAGGAAAAAAGT
GTTCTAAGTTGGCCATCGTCCGATGGTGAAACTAAGTCTGTGACAACTTCTGATGGCATA
AGTGATTTTATCATGTCATCACACTTTAAGGGTAGCAAAGTTGAAGTCAAAACTATTGAC
TCTCAATTATCTGTTGCTGGTGGTGTTTTGGTGATAGTTATGGCTTATTTAATTGGGCAA
GACAAGTCAAGAAAAGGGTTTTCTCAAACTTTTTTTCTTGCTCCACAAGAGACAGGATAC
TATGTGTTTAATGATATTTTTAGATTTATTGGTGAAGACAAATCTTCAACAATTGTTGAG
GAAAATGGTTCAATTGCTACTCCTTTAGCTACTCAGAGCAAAGCTGAAAACAATGTTGAT
GATGAAGTCGACCAGAAGCCTTCAAGCCCAAAAGAAGAAGAACAAAAAAAGAAGGCCCCT
GTGGCCCCCGTCATCGTTGAGAACGAGGCTCCAAAAATTACCTATGCTTCAATGATAAAG
CAAGGTAGGTCCTCGCCACCAAAAAATGTTGGCCTACCATCGGCTCCTAAAAAGCCGCAA
CCCAATAACTTCGTTCAGAAGTCTAGTTCGGGTGATGTGTTGAAAGTTGCAAGTACTCCT
TCAACCAGAGACGTTGCGCAAGACAATTATCATAATGACATCGAATATAAGTCGATATTT
GTTGGAGGATTACTACCCAACACAACAAAAAATGATTTATATGCTGTTGTTAAAGAGTTT
GGACCCCTTCACATTCAAGACGTTCAACTAAAAGCTTATGAAGTATACGAGACTCATCAC
ATTATGGTGAAGGGGAAACGAGCTTACATGAGATACAAGAGAACTAACAAAGGGCTACCA
AATGGAATGACTCTATTCTATATGGGAATTGTTAGTGGCATGATGTCTGCTGTTATTGCA
AACAGAAAAGAGATAGAAAAGGTTAATGAGAAGTTTAAATGGACCAAGAGTTTAGTACAA
GAGTTAGAAGAGGAGCTCAATGTGAAAGAGATTGCTAATGATGATTATGAAGATCCAAAT
CTATATAGTCTCTCTATGTCAACTGTTGATGAACCAACAAGACAAACCAGTGAAGCAGAA
AAACACGAGTCGATGAGCGAAATTGAGGCAGAGCTTGAAGCTGAATTGGAAAGGTTGGAA
ATGAGCTTGAAGGTTTCAACCTTTGAAAGAATATCTGATTTTGTTGAGCTAGATCCAGAA
GATGAAATAAATGTGGTTCAAGGAGACTTAAAACTAGATTGCCTCAGTGTACAGAGTCCT
GATTCATCAGAATCAGATAGTCATACTAATGGAACTTGGATTGTTCATTCTAAACCTGCC
AACTATCCTGTTTCCCCGAGGGAGCTTAGCTCGCGTCTGCATGAGGTAATAGAATCCAGA
CTAGAAGCTCGAATTAAGGAGCTCGAAACAGACCTTTATCATAGCCAAAATAGAGTTTGT
TCATTGGAAACACAGCATAATCTCTCTCAAAAGGACTTTGCATCGCGGGAATCAGAGTCA
TCTGAATGTCTACAAAGTTCATATTGGTATCATGAGGCTGATGAAGAGACCATCAGGATC
ATGCATGGAAGTGAAAATGCTTTTGACACTAATACAAGAATCCCTCCTTTTGATGGAGGA
TTGATTGATAGCCCAAACGAAAAAAAGGGTGGCCTGGTGCACGAACGTAAGCAGCCTACC
TTGATGCAATTGTTAAAGACAGAATCCATGGCTCAAACCCGTGAGCTGCAGGTCACACGG
AAACAACATTACCATTGCTCCAAGGTTCCCATTCATTGA
