Microarray Probes on PGSC0003DMT400072742
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19223_PI426222305 |
JHI_St_60k_v1 |
GCTGTGGCCTTTACATCTCGAAGATTAATGACATAATGCTAGTGTTTTTTCGAGATAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072742
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072742 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G02290.1 |
+3 |
5e-38 |
140 |
96/298 (32%) |
RING/U-box superfamily protein | chr3:459385-460688 FORWARD LENGTH=231 |
Transcript Sequence (1500 bp)
>PGSC0003DMT400072742 1500 pgsc_dm_v3.4
TTTTTTCTTCCTTTTGTGTTAAACTTCTCTTATAATTCTCCCAATTCTCAAAACTCCTCA
CTTTTCTCACAAACCCTGCTCCAAAACCCTGCTTTAAAGGGAAATCTGGCTGCTGGATTG
AGAAGGGGATTGCTAATGAAAGGTTGAAGATTTCTATAACAAATTGAAGAAACATCATGG
GTTCAGTTTGTTCCTGTTTCACTGTTCGGGATGTTGGAGGGAATGCTGCCTCGAATGATC
AAAATCATACTTTCTGCAAGTGTTTCAGTTGCTGCTTTCAGAACTTAATTAATAAGTGTG
GAACCATATTTGGGCAAGCACAAGGAACTGCTGGGACTTCAGTTAATCAAGGCCCGCCAT
CTTCGACTGCTCCAAATGCCATAAACAATTCATGTAATACAATCAGGCCTCAGGATAGAC
GTTTACCAAATAGTGCTGCTCCTCCAAGACGGCTTCAAATACAAGAAGATGTTGCATTAA
GACGACAGGACAAAGGAACAAGTCATTCACGAGTTGAGCCCGAACCAGATATAGATGCTG
ATATTGAAACAACACAAAAGCTTCTAAAAGCAGGCAATCTGCTTAAATCAGACTCTGCTC
ATCAAGGCCCGTCATCTTCGACTGCTGGAGTTACCATCAACAGTTCACGTAATACAATCA
TGTCTCGTGATAGAGGTTTACCAAATACTGCTGCTCCAAGACAGCCACAAATGCAACAAG
ATGCTGCATTTAAACAACAGGACAAAAGAACAAGTCATTCACGAGTTGAGCCTGAACCAG
ATGCTGATGTTGAAATAACAGTAGGATCAGACACAGTGCTTAAATCAAACTGTGACGGAG
GATCTAAAGAATATCGTCCAGAGATCATGGTGACAGCTGTTCCATATGTCGTTTGCTCAT
CAGAAGATGAGGATGTATGTCCCACATGCCTCGAAGAGTATACACCAGACAATCCCAAGA
TATTTACAAAATGTTCTCATCATTATCACCTCAGCTGTATATACGAGTGGCAAGAGAGAA
GTGAAACATGTCCAGTTTGTGGAAAGTTGATGGAATTCGAGGAGACAAATTGATGTTCAG
AGTTGAAGAGAAGGAGCTTAGTAAGGTGCACATGATTTTTTACCACACTCTGGTCCCCTG
ACATCTACAAAGGATCGATGAGTAACGCGATACAAAGTCTAGAGAATTTTTGGTTCTCCT
TAAAAACTCTCTTTTTGGTATATACTTTTGCTGCCATGGGCTTTTTCGTGGGTGTTTTAG
GCCCGTGAGTGAGATCTCTGTTCATTGCAGGCATCTCCGCGGTTCTTCACCACATGGATA
GTACCAAACCCTTGTGCCCCGACCCTTGATCAGATAAAGCTGAAATTTAGATTTTTCAAA
TTATCTTTTTTGCGCTGTGGCCTTTACATCTCGAAGATTAATGACATAATGCTAGTGTTT
TTTCGAGATAATAACTATACATAAATATTATAAAGTGCTGAAAAAGCTATTTTAAATGAG
