Microarray Probes on PGSC0003DMT400072022
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50383_PI426222305 |
JHI_St_60k_v1 |
CCTTAAATATGCACCGAACGCTTTTAGTCTTTTAAATTTATGGCTTTGTTTGGTTTCGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400072022
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400072022 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G51680.1 |
+1 |
1e-77 |
245 |
131/269 (49%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr3:19173622-19174667 REVERSE LENGTH=303 |
Transcript Sequence (1184 bp)
>PGSC0003DMT400072022 1184 pgsc_dm_v3.4
CATTCAATGAGAGTGTAATACACTCATTATGTCATGTAAGCAAAAAATGTTAAAATGACA
CAAGGAAACTTTACATGAAGTGTTTAAAATGAACGTCACTTGACTAAGATGTATAAGTGA
AATATGGTGTCAACTTTAGAATGTCATCGATGAGTTAAGCCCAAGATTAATGTTAAGCAA
AGTTATAGTATTTTTTATGTGATTAACCATATATTACATAAAACATAAATATGAAAGGAA
ATATTAAAATAACATCCATGGCCATTGTATTACTTTAGGCTTGAAGGTAAAGTTGCAATC
ATAACTGGTGCTGCTAGTGGCATCGGTGAAGTGGCTGCAAGACTTTTCACGAGACATGGA
GCTGTAGTGGTGATTGCAGACATTCAAGATGACTTGGCCCAAAAAGTTTGTGAAAATTTG
GATCCATCATCAATCACCTATGTTCATTGTGACGTTACAAAAGAAGATGACCTAAAAAAT
GTGGTGAACACTGCGGTTTCCAAGTACGGCAAACTCGACATCATGTACAACAATGCGGGT
ATTGTGGATGAAATAAAATCCAACATTCTTGATAATGAAAAATCTGAATTCGAGAAAGTT
ATTAACATTAACCTCATAGGTACATTTGTGGGGATTAAAGAAGCAGCCCGAGTCATGATC
CCTCGAGGTCAAGGTAGCATAATTTCCACTGCTAGTGTTTGTGCATCGATAGGCGGTGTT
TGTTCTCATGCCTACACGAGCTCAAAGCATGGTGTTTTAGGACTTACTCGGAATGCTGCA
GTTGATTTAGGACGATATGGTATTCGTGTGAATTGTGTGTCGCCATACACTGTTCTTACA
ACTATGGGTTTATATACCTTAAAAAAAATAGGCAAGGACAGTTCAAATGTTTATTCTAAC
TTGAAAGGTGCTACACTTACTCCCAATGATGTGGCTGAAGCTGCTGTTTTCTTAGCAAGT
GACGAGTCTAAGTGTGTGAGTGGCCATGATTTAATTGTTGATGGAGGATTCACTGTTGAG
AATTCAGGTTCATCCATGTTCAAGTAATTAATTTTACTTGATAAATGTAAAAGAAAATAA
TAAAAAAAGCGTGTCTTACGTTTGAGGGAACGTTCAAATATTTCCTTAAATATGCACCGA
ACGCTTTTAGTCTTTTAAATTTATGGCTTTGTTTGGTTTCGGAT
