Microarray Probes on PGSC0003DMT400071866
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34433_PI426222305 |
JHI_St_60k_v1 |
GTCCCACATGGTTGATCAATATTTTCTAAAGACAATGGGTGAAGACTTTAGCCATATCGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071866
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071866 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G25420.1 |
+2 |
2e-171 |
489 |
240/349 (69%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:12990982-12992409 REVERSE LENGTH=377 |
Transcript Sequence (1326 bp)
>PGSC0003DMT400071866 1326 pgsc_dm_v3.4
CTCCTAACGGCTTTCGTTTTTTTCTTCATCATTTCTCTCTTATAACTTTCCTATTTAATT
TTCTCTAAGAAGAAAATTCATGACAATGGCCATTGATTGTATGGTCATGCCTATGATACA
AACATCGTCCGATGAGAAAAAACCACTCATTTTCGATTCGTCCGTGCTTAAACATGAGTC
CAACATTCCTAGACAATTTATATGGCCGGACCACGAGAAGCCTAGTGGTGGTGTTCCTGA
ACTTGATGTTCCACTTATCGATTTAGGGGCGTTCCTTTCTGGTGATCCAATTGCAGCTAA
GCGAGAATCTAGGCTCGTTGATGAAGCATGTAAGAACCACGGTTTCTTTCTTGTGGTAAA
TCATGGTGTTGACACTAATCTTATCTCACTTGCACATCGTTATATGAACATGTTCTTTGA
GTTACCACTTTCCAATAAGCAAAAGATTCAAAGGAAGAGAGGAGATCATTGTGGTTATGC
TAGTAGCTTTACTGAAAGATTTTCGTCTAAGTTACCTTGGAAAGAAACACTTTCTTTTTC
ATATTCTGCCCTACAAGGCTCGTCCCACATGGTTGATCAATATTTTCTAAAGACAATGGG
TGAAGACTTTAGCCATATCGGAAAGTTTTACCAAGAATACTGCAATGCGATGAGCACTCT
CTCTTCTGGGATCATGGAACTCTTGGGTGAAAGCCTGGGCGTGAGCAAGAACCATTTCAA
ACAATTCTTTGAAGAAAATGAATCGATTATGAGACTCAACTATTACCCAACATGTCTAAA
ACCAGATCTTGCGTTGGGAACTGGACCACATTGTGACCCAACATCATTAACCATCCTCCA
TCAAGACAGCGTCTCAGGGCTTCAAGTTTTCATGGACAATCAGTGGCGCTCCATCAGTCC
AAATCTTAGTGCTTTTGTCGTTAACATAGGCGACACATTTATGGCGCTTTCAAATGGAAG
GTATAAAAGTTGTTTGCACAGAGCTGTAGTAAACAACAAGACACCTAGAAAATCTCTTGC
TTTTTTTCTTTGTCCTAAGAAGGATAAGGTGGTGAGGCCACCAGCAGAATTGGTGGACTC
CAATAATCCTAGAATATATCCAGATTTCACATGGCCAACTCTCCTTGAGTTTACACAAAA
GCATTATAGAGCTGATACCAACACTCTACAATTCTTCTCCAATTGGCTTCAACAGAGAAC
TACAGAGGTTTAAGGCATACTCAATAAGTTTCTAGTAGGATTTCTGATATCCAATGTAAA
TCAAGACCTTAGTCTTTTTGTATATATATATATTCCATGTTATTTAAATTGTTTGAGTTA
CGAAAA
