Microarray Probes on PGSC0003DMT400071285
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31874_PI426222305 |
JHI_St_60k_v1 |
AATGGTGAAGATGCTTGTTGAAATGGGTGCTGACCCTACTCTCACTGAATTGCATCTTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071285
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071285 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G31820.1 |
+3 |
2e-20 |
96 |
85/275 (31%) |
Ankyrin repeat family protein | chr2:13530350-13532562 FORWARD LENGTH=662 |
Transcript Sequence (1807 bp)
>PGSC0003DMT400071285 1807 pgsc_dm_v3.4
GTAGGGCTTGCATTTCGTACTGTCAAAACAAAGAGTGTTACCTCTTTGTCCGATTTTGTG
TTTTTCTTCAACCTCTTGTGTATGGTCCCCACGAAATCACATGTACCCATTATTTAGTAT
CACATGCATCGTTTTTGTATGTATATAACCCGACGTCTGTGTAATATCCCTGTATCAATC
TTGAAATTTGAATCTTGAAATCATATTCCCTTTCAAAATTGGAGCATAAATTATCATTGA
TGGAGAAATTGGTGGAAGTATCAGAACCAGAAATAGGAATAGATTTTGCACTAGGCTGCA
AATGCCGAGCCACAGTGAACCTCAGATCACTTACTGCAGCCTATCCAATAGCATTCAAAG
TTCAAACTTCTTCTCCTCACAAATTCCTTGTCAATCCACCCAGTGGCCTAATATCACCTT
TATCTTCAACCTCTTTCCAAGTGATTCTCAAGCCCCAACCCCAAATCCCTCCCACTTTCC
CTCGCTCCCCTTCTGATCGCTTCCTCATTAGAACAACAATAGCGTCAGAACTCGAACTCG
AACACAACTCAGCTTCTGAGTCGACTCGATCCGAAATCGTGAACTCCTGGTTCAAGTCAA
TTGGGCATCGTTCAACTCATGACATAAAACTCAAGGTGGTTTTCGTAGGTCCTTTTCTTC
TCCGTCATGCCGTTAGTAACGGAGATTGTGATTCCGTTAGGAATATTATCAAACGGCAGC
GATCCATTTTCACCGAGTTTTCAACCCGGGAAGCAGAGGCACTCTTCCGAGTAGCAAAGC
AGCTCCCTAATAACAACAACGACATGGTGAATATTTTGATTGAAGGTGGACTGAAGGTGG
ACTCATGTACTGAACCAAACGACGTTAAATGGGTGTCCAAGGGATGGACGGCGTTACATA
TCGCCGTCGCGAATGACCGGAGGGAAGAGATTGAGAGGTTATTGACAGTGAACGGAGGGT
GCAGGTGGTTGGATAGCAGAGACAAGGAGGGAAGAACGCCGTTACATTTAGCAGCGAGTA
AAGGGTTAATGGAAAGTGGTAAGGTGTTGATAGGTGCAGGTGCGCAAGTGGATGCGAGAA
GCAAAGATGGTCGAACAGCTTTGTTCAGAGCTGCTGCTAATGGCGACTGTCAAATGGTGA
AGATGCTTGTTGAAATGGGTGCTGACCCTACTCTCACTGAATTGCATCTTGGGCGTTCAG
CTCTTGATATCGCCAGAGCTAAGGGACACGGGGTAGTCGTTACAATACTCGAAAGAGGAG
AAGCAGTTCTACATGCAGCAAGGCGTGGAGACCTTCAGCTACTCGAGACTCTTCTCGAAA
AGGGAGCAACCACCAACTTCCACGATCAATATGGTCTAGCAGCACTTCACATGGCAGCTA
TTAAAGGAAAAAAAGACGCAGTAATGATATTGGCTGAATTTGGAGCCGACTTGGAATGTC
AGGACATAGAAGGTCACACTCCGCTGCAAATGGCAGTCGAAGGCGGATGTGCACAGACGG
TAGAAGTGCTGCTGAACAGAGGAGCCAATGTAAATGCCAAGAACAAGAAAGGTGCCACTC
CACTTTCTGTTTCTAAATTTTTGGGTTTTGAAGAAATAACGCAGCTACTCGTTGATGAGG
GTGCAGTGCTTTCTGTAATTCCTTCAAATTCTCCATCTCCCGTATCTTGATTTTTGGCTA
TGTAGATGTACAACTTTAATGAATATATGTATAATATCAGGCGATTCAAGTAATGAACAA
AGTATAAATTTTCCGTCTTTCCAACAAATCTTTGAAGTTCTACATCGGTCAAACAATAAG
ACTCGTC
