Microarray Probes on PGSC0003DMT400071278
Probe ID | Chip | Probe Sequence |
---|
CUST_31838_PI426222305 |
JHI_St_60k_v1 |
ACAGACTCACATTCTTTGAGCTAGAAGACAACTTACGGGTTCAGCTGAATCAAGTAGGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071278
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071278 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G39510.1 |
+1 |
2e-46 |
164 |
102/304 (34%) |
nodulin MtN21 /EamA-like transporter family protein | chr2:16491358-16493085 REVERSE LENGTH=374 |
Transcript Sequence (1032 bp)
>PGSC0003DMT400071278 1032 pgsc_dm_v3.4
ATGGCTATGGAAAAGTTCAAACCTCATCTTCTTATGATTTTAGTACAAATTTGCTACACT
TTTCTTTATTTCATTACTGAAGCTTCATTCAGCCATGGGATGAACCCTCATGTCTACGTA
ACTTATCGAAACATTGTGGGAGGTCTAGTTATATTACCGTTCGCGTATGTTCTTGAAAGA
AAAAAGAGACCAAAGTTAACTATGGCTTTGCTATTGGAGTTCTTTGTACTTTCTCTAATG
GGAGTGAGTTTTTTGAACATGTACTTTGTGAGCTTGACTTTCACTTCTCCAACATTTATA
GCTTCTATGCTCAACACTATTGCTGCACTCACCTTTGTATTGGCAGTAATCCTCAGGTTG
GAAATTGTTAATGTTGAAGACCCTAGAGGAATAGCAAAAATCATAGGAACACTTGTTTCT
TTGGCTGGAGTTATGATTATGACATTGTACAAAGGAGCAATTTTGAAGAATTTATGGCAT
CCTATTATATATATTCATCAAGGAAACAATGTTGTCAAGGAAGATTGGGTCAAGGGATCA
ATTTTGACTATTGCTAGTTGCATTACAAGGGCCATATGGTACATCATGCAGGTTGGCTCG
ACAAGAGTTAGGCTATGTCCAGTTTTGGGTCGTGACAGACTCACATTCTTTGAGCTAGAA
GACAACTTACGGGTTCAGCTGAATCAAGTAGGCTTACACACAGAAAAGATATCCAGCACA
ATTGTCACTGACAACATGGAGCAAAAGGGACCTGTTTTTGTGACTATGTTCAATCCACTA
TCAACTATACTAGTGGCACTTCTAGCATACTTTGTGTTTGGGGAAAAGCTATATATGGGC
AGCATCATAGGAGCAATAATTGTCATTGTTGGCCTTTACTTGCTCTTGTGGGGAAAAGAA
GATCCAAAATCAGAGAGAAAAGATGAAGAAAAATGCTGCACAATAAAAAAAGAATTACAT
CATGAAGACAATATGATGCAGAAATTCACATCAGATGCTAATCCTATGGATACTAAAAAA
CCAAAACAATAA