Microarray Probes on PGSC0003DMT400071160
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49952_PI426222305 |
JHI_St_60k_v1 |
ATAACCCGAGGTCTCAGGTTTGAGTCAGGTATGGAGTCGCCTTTGTTAGTAAGCACTTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071160
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071160 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G54210.1 |
+1 |
1e-85 |
271 |
143/201 (71%) |
Ribosomal protein L17 family protein | chr3:20067672-20068385 REVERSE LENGTH=211 |
Transcript Sequence (1985 bp)
>PGSC0003DMT400071160 1985 pgsc_dm_v3.4
CTTATCCATTCAGATAAACCCACAGCTCATTCGGAACATAACCAGAGAAGCAAAATATCA
AACTAGGAAGCTATGGCTTCTGCAACTTGGAGCATGTCTTGCTTGAAATCGGCTCTTCCT
TCAATTCAACCAATTTCCAACTCTTCACTTCGATTCTCTTCTGGGTCTTCTCCATCTCGT
CTCAGGATTTGCAAACCCAAGTCCAGTTCAACAATTATTCAGTCCTTCGTGGGTCTTGCT
CCCCTGCATCCACTTTTGTCCCTCTCTTCCCAAGACTCAAAAAGTTTTGAGGACTCATTC
ACCATTATTGATAGTGGTGGCCGAGTATTTGCCATGAGACATGGCAGGAAGGTCCCCAAA
CTGAATAGACCTCCTGATCAGCGTCGGGCACTTCTGAGAGGTCTCACAACTCAGCTCCTC
AAGCATGGGCGTATAAAGACCACTAAAGCGAGGGCCAGGGCGGTTAGAAAATATGTTGAC
AAAATGGTCACAATGGCGAAGGATGGCTCTCTTCATAAGAGAAGGCAAGCTCTTGGGTTC
ATCTATGAGAAGCAGATAGTGCATGCATTGTTTGCTGAAGTTCCCGAAAGATATGGAGAG
AGGAATGGAGGATATACTAGAATAATAAGAACTCTACCAAGGCGAGGGGACAATGCACCG
ATGGCATACATCGAGCTTGTTTAGCAACTGAAAAATTTATTTTCCAGGTTCATTTTTGTT
GGTTCTGAATTATGATGTGATCTAAGAGATTTGTTGGTTCACCAATTATTCCATCCCAAT
TTCCTGTATGCCGTTCAATTTTGATTTGCAATACTACTCTGTTTATTTGGTTGGTCACCT
TTGATCCGTTTCAAGCATTTAGTTTTTGACCACTCCATGTTATATCAAATATGGTTATTT
TGATGGAAATTGCCAGAACATGATAGTGTAACAATTTTTCTACATCAACCAATAAATGCA
TGAACGGAGATTAGGATGGGGGAAAACCACTAAAGCAACCCGTCTCAGCAAGATTGGATA
AATAAGCCAATATTGTAGGATGAAACCGAGTGTTGTAACGTTTAGTACTGCTTATGAAAC
AAAAATAAGTAGAAGCTGCATCTACTGCTGAAGTGGAGCAATATCTGTCTGAGGAAGAGT
TGCATCATTCCTGCTTACTGTCTTTTATGAAAGGAATTGGTAGTTTTTGAAGAACCTTCT
CATCCACTTGACTATACTGTTTCCTGAGTTCTTTTATAGCCATTTCTCCATAGGTATCTA
CTTGATCTCCATACTTCTCATAGAAAAATGGTACTGTCAACAGCATGACAGTTGCTGTCC
AAAAAATGAAAATTTTGGTTATCTTGGTAAATCACTATGAACACAGAAAACAGGTCACAC
ATCAACCAACCTACTGAATTTCCACATACCAGTGAGGAAATTTCGTAAGTTAGGCTTGTG
CAGCCAACAGAAACAAAATGGAAGTGTATAGAGAACTTACTGAGGTATACAAGGGTCAGA
AAACTGAACCATCTGCCAACAATGGAAACAATCCACAAGCTAAAAATTGCCTGCAGAGGA
GCATTTAATCACATGAACTTGTTGCAGTTGAAATGGACTTTACTAGTAATAACAAAGTTC
AAGGTGTGGGAAATTTTACATATAGAAACTTCTTCAAATCATTTCCGGATGCTACTTCCC
GAAAGATACCAGATACACAGGTGCATTGATCCCTCAGTAAGAGGACCAATTGCATCCATA
TCTCTTCTGGCAATTCAATCTTTGGTAACTCTACAAAACTCCTGCCAGAGAATACAAGAT
GATCAATTTAGTACAACGCTCGAGCAAGAAGCACAACTAGCAAAAACATGATTGCAGATC
AGGAGGAGAGTCAGATGATTGGAACCAACTCATAAATACCAGCATTTAACTCCTTCATCC
ATAACCCGAGGTCTCAGGTTTGAGTCAGGTATGGAGTCGCCTTTGTTAGTAAGCACTTAT
CCCCC
