Microarray Probes on PGSC0003DMT400071154
Probe ID | Chip | Probe Sequence |
---|
CUST_49958_PI426222305 |
JHI_St_60k_v1 |
CTTGATTCTAATTCTTGCCTCCGGCTCTAGTGTAGTGGTAATCGCGCAATGCATAATGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400071154
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400071154 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G12800.1 |
+3 |
4e-110 |
322 |
187/220 (85%) |
photosystem I subunit l | chr4:7521469-7522493 FORWARD LENGTH=219 |
Transcript Sequence (875 bp)
>PGSC0003DMT400071154 875 pgsc_dm_v3.4
TCCTGTCTGACTTAAGTGTCAATATTTGCAAAATGGCTACTGCAGCTTCCACCATGGCTA
GCCAGTTGAATAGCAGCTTTGCTTCGTCTTTAACCAGAGGTCACGGCCTTGTTACTCCTA
AAGGCATTTCTGGTGCACCTTTCAAGATTTTCCCTTCAACAAGAAAGTCTTGCTTCACCG
TTAAGGCTGTCCAAGCTGATAAACCTACTTTCCAAGTGATTCAACCTCTAAATGGTGACC
CTTTCATTGGAAGTCTTGAAACTCCAGTAACCTCAAGCCCATTGATTGCATGGTACCTCT
CCAACTTGCCTGCCTACCGGACCGCGGTGAACCCGCTTCTCCGGGGAGTTGAAGTGGGCC
TGGCCCATGGATTCTTACTAGTTGGGCCTTTTGTAAAGGCTGGTCCATTAAGAAACACAG
CTTATGCAGGGGGAGCTGGTTCATTGGCAGCAGCAGGACTTGTAGTGATCCTTAGCATGT
GTTTGACAATTTATGGAATTTCATCATTCAAAGAAGGAGATCCATCAACAGCACCAGCAT
TAACATTAACTGGTAGGAAAAAAGTACCAGATCAATTGCAAACTGCAGATGGATGGGCTA
AATTCACTGGTGGATTCTTTTTTGGTGGAATTTCTGGTGTCACCTGGGCTTATTTCCTCC
TTTATGTCCTTGATCTTCCTTACTTTGTTAAGTAAATTTCTGTACTATTATGAATGTTAA
ATTGGATATATCAAAGTTGTATATCGAACCGCTGATCTCTTGGAGAAGTGTAATGAATGT
TTACTTTAAACGCTAGCATATCCGCACATTTCGTTCTTGATTCTAATTCTTGCCTCCGGC
TCTAGTGTAGTGGTAATCGCGCAATGCATAATGTG