Microarray Probes on PGSC0003DMT400070911
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27422_PI426222305 |
JHI_St_60k_v1 |
TTGCTCTTCTGTTGCTCTTTTGGTTGACTACTGGATCTTCTAATTCAAGGTGTTTCTAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400070911
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400070911 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G63840.1 |
+1 |
3e-16 |
73 |
29/54 (54%) |
RING/U-box superfamily protein | chr1:23689991-23690491 REVERSE LENGTH=166 |
Transcript Sequence (545 bp)
>PGSC0003DMT400070911 545 pgsc_dm_v3.4
CAAAAAATAAATAAAATGTCATCATTCACTAAATTCTTCTCATTTTTCAATAAACTCATC
AACATTTTATTCTCCTCATGGATTCCTCAAGCATTAACATTCATAATGCTTTTGTTTTTA
GTTTCTATCAGTGCATACGAACAAAGACAACAAAGTTACAATTGTTGGAAAGTTATAAAC
AAAAAGAGCATTAAATTCGTTTACAAAAAGCGAAAATTACTTGGATTTGTTGCAACTGAA
CCGATTGATTGCGCGATTTGTTTATCGGATTTCGAGCACGGAGATAAAGGAAGGAAAATT
GAAAGGTGCAGTCATATTTTTCATGAAAATTGCTTAGATAAGTGGTTGATGCACGGGAAA
GGACAAGCCACGTGTCCGCTTTGCCGGAGCGTAATTATACCGGAAAATATGGTGGATGAT
CACCGGAAAGTTGGAGATGAAAGACTTACGTTTGGTTTATTTGAGGAAGAACTTGCTCTT
CTGTTGCTCTTTTGGTTGACTACTGGATCTTCTAATTCAAGGTGTTTCTAATTATCAAAT
TTTGC
