Microarray Probes on PGSC0003DMT400069947
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30314_PI426222305 |
JHI_St_60k_v1 |
TGGCGACAATTATTTGAAACCATATGTTATATCAGAACCGGAGGTGACGATAACAGATCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069947
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069947 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G11410.1 |
+2 |
5e-145 |
427 |
254/424 (60%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (1665 bp)
>PGSC0003DMT400069947 1665 pgsc_dm_v3.4
TTTCAATTTATGAGTTATGAGTCTTACTTCCTCTTGTGTGTAAACTTAACAAATATCAAA
AAAATATATACATTGAATTTATTCTCAATTTTTTCTTTCTATAATGGCTGGGATGTGTTG
TGGGGTTAATATAGCTGAAACTGAGGCTACTGCACCAGTTGAGCCAAGTTCAGAAGCTGC
AAGGAGAAGAAGAATGGGAATTCATCAGTTCCGTTTTGTACCCACCGATGCTGCAGCATC
GGTGGCGGTACAGGAAAATGGACGGAAAAGGCATAGGATTGAGAAAGTTATTGATAATAA
AAAGAGACAGAAATTGGAAACTAGTGTAACGATTTCGTTGTCACCTCCGCCGGTGGCGGT
GGTGGTGGCGGATGAACAGAAAGGAAAGGATAATGAAGTGTTGGATCTGTCGGAATCTGG
TTCTCAATCTGTTGAAATTGAGCCTGATTTACCCAAATTTGGTGCGACTTCGGTATGTGG
AAGAAGAAGAGATATGGAAGATGCGGTTGCAATTCATCCTTCTTTTTGCAAAGAGAATAG
TGAAAGCTCAAGCAATTTACATTTCTTCGGTGTTTACGATGGCCATGGCTGTTCCCATGT
GGCGATGAAGTGTAAAGATCGAATGCACGAGATAGTGAAAAACGAGGTGGAGAAGGAAGA
AACTCCATGGAAAGAAGCAATGATTCAGAGCTTTTCTCTAATGGATAAAGAAGTTGTCAA
CTATTCTAGCACACTCCGATCTTCTACCTCAGGTTCCAATTGTAGATGCGAGCTTCAGAC
TCCACAGTGCGATGCCGTTGGATCAACTGCTGTCGTTGCCGTTGTAACTCCGGACAAAAT
CATCGTCTCCAATTGCGGTGATTCTCGTGCCGTCCTCTGTAGAAACGGCGTCGCTATTCC
TCTTTCCGTTGATCATAAGCCGGATCGACCTGATGAATTGAATCGGATACAAGAAGCCGG
TGGCCGTGTTATATATTGGGACGGAGCTAGAGTTCTCGGCGTTTTGGCAATGTCTCGAGC
AATTGGCGACAATTATTTGAAACCATATGTTATATCAGAACCGGAGGTGACGATAACAGA
TCGAACCAACGAAGACGAGTGTTTGATATTAGCCAGTGACGGATTATGGGACGTGGTATC
GAACGAGACCGCGTGTGGCGTGGCACGTATGTGTTTGCAATCGAGACGGCCACCGTCTCC
GGCGGGTTCACCGGGAAATGACATTACGGTGACCGGCGCCGGAGAAAGCTCCGACAAGGC
CTGTTCAGATGCATCAATTCTGTTGACGAAATTAGCCTTGGCTAGGCACAGTAGTGATAA
TGTTAGTGTTGTGGTGGTGGATTTGAGAAAAAATGTATAACATTATGATGGTGATTAGTA
CTAGTTTTAATTTTAATTAATTAATCAAGTGTATAATTAAGGGGAAACTCTAATTTTAGG
TTTTAATTAGCATGGGTTGTGCTAATGAAGCTAAGATTGAAGATGATGTTTTGATTTATT
AGTTTAGCTGATTTAGCTGCCTATGTTGATGATTAGTAATGCTAATTATTATTATTATTA
TTATTACTATATTTTAGAGAAATGGAGATGGAAATTGTAAAGAGGTGGATCTTCTCTCCA
ACTGTCCCAGATTTTATGTGAAATATAGAAAATACAAAATCATAT
