Microarray Probes on PGSC0003DMT400069946
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30338_PI426222305 |
JHI_St_60k_v1 |
CGAGCAATTGGTAGGCATATACTTCTACTGGATCTAAAATTGTGAAGCAAAAATGAAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069946
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069946 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G11410.1 |
+1 |
8e-106 |
126 |
73/112 (65%) |
protein phosphatase 2CA | chr3:3584181-3585649 REVERSE LENGTH=399 |
Transcript Sequence (1922 bp)
>PGSC0003DMT400069946 1922 pgsc_dm_v3.4
TTTCAATTTATGAGTTATGAGTCTTACTTCCTCTTGTGTGTAAACTTAACAAATATCAAA
AAAATATATACATTGAATTTATTCTCAATTTTTTCTTTCTATAATGGCTGGGATGTGTTG
TGGGGTTAATATAGCTGAAACTGAGGCTACTGCACCAGTTGAGCCAAGTTCAGAAGCTGC
AAGGAGAAGAAGAATGGGAATTCATCAGTTCCGTTTTGTACCCACCGATGCTGCAGCATC
GGTGGCGGTACAGGAAAATGGACGGAAAAGGCATAGGATTGAGAAAGTTATTGATAATAA
AAAGAGACAGAAATTGGAAACTAGTGTAACGATTTCGTTGTCACCTCCGCCGGTGGCGGT
GGTGGTGGCGGATGAACAGAAAGGAAAGGATAATGAAGTGTTGGATCTGTCGGAATCTGG
TTCTCAATCTGTTGAAATTGAGCCTGATTTACCCAAATTTGGTGCGACTTCGGTATGTGG
AAGAAGAAGAGATATGGAAGATGCGGTTGCAATTCATCCTTCTTTTTGCAAAGAGAATAG
TGAAAGCTCAAGCAATTTACATTTCTTCGGTGTTTACGATGGCCATGGCTGTTCCCATGT
AAATATCCCTAAATCGACTGTGAATTGGTATTATTTAGGTGAAATTTTAGCTGAACTTGT
TTGATTTTTTTGTAGGTGGCGATGAAGTGTAAAGATCGAATGCACGAGATAGTGAAAAAC
GAGGTGGAGAAGGAAGAAACTCCATGGAAAGAAGCAATGATTCAGAGCTTTTCTCTAATG
GATAAAGAAGTTGTCAACTATTCTAGCACACTCCGATCTTCTACCTCAGGTTCCAATTGT
AGATGCGAGCTTCAGACTCCACAGTGCGATGCCGTTGGATCAACTGCTGTCGTTGCCGTT
GTAACTCCGGACAAAATCATCGTCTCCAATTGCGGTGATTCTCGTGCCGTCCTCTGTAGA
AACGGCGTCGCTATTCCTCTTTCCGTTGATCATAAGGTGCGTTTTCAATTCTTTTCTTCA
AATAAGTGTTTCAATAATTTTGAAATCAAGTAACTGATGTTGAATTTGTGTTTTTTCAGC
CGGATCGACCTGATGAATTGAATCGGATACAAGAAGCCGGTGGCCGTGTTATATATTGGG
ACGGAGCTAGAGTTCTCGGCGTTTTGGCAATGTCTCGAGCAATTGGTAGGCATATACTTC
TACTGGATCTAAAATTGTGAAGCAAAAATGAAATGTTAACTCGAATAATGTTCTAAATCA
TCTTTATGAATATTTATTTCAGGCGACAATTATTTGAAACCATATGTTATATCAGAACCG
GAGGTGACGATAACAGATCGAACCAACGAAGACGAGTGTTTGATATTAGCCAGTGACGGA
TTATGGGACGTGGTATCGAACGAGACCGCGTGTGGCGTGGCACGTATGTGTTTGCAATCG
AGACGGCCACCGTCTCCGGCGGGTTCACCGGGAAATGACATTACGGTGACCGGCGCCGGA
GAAAGCTCCGACAAGGCCTGTTCAGATGCATCAATTCTGTTGACGAAATTAGCCTTGGCT
AGGCACAGTAGTGATAATGTTAGTGTTGTGGTGGTGGATTTGAGAAAAAATGTATAACAT
TATGATGGTGATTAGTACTAGTTTTAATTTTAATTAATTAATCAAGTGTATAATTAAGGG
GAAACTCTAATTTTAGGTTTTAATTAGCATGGGTTGTGCTAATGAAGCTAAGATTGAAGA
TGATGTTTTGATTTATTAGTTTAGCTGATTTAGCTGCCTATGTTGATGATTAGTAATGCT
AATTATTATTATTATTATTATTACTATATTTTAGAGAAATGGAGATGGAAATTGTAAAGA
GGTGGATCTTCTCTCCAACTGTCCCAGATTTTATGTGAAATATAGAAAATACAAAATCAT
AT
