Microarray Probes on PGSC0003DMT400069934
Probe ID | Chip | Probe Sequence |
---|
CUST_30463_PI426222305 |
JHI_St_60k_v1 |
GTGTCTCTGATGTTTAGAGTTTGTGCATGTATATAATGGTGGTTTGAAAATTTTATGGGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069934
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069934 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G55580.1 |
+1 |
1e-174 |
353 |
200/330 (61%) |
Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |
Transcript Sequence (1967 bp)
>PGSC0003DMT400069934 1967 pgsc_dm_v3.4
CAACAAACACAGAGCAGAAAAATCTGAGATTGTTAGTGAATTTTCATCAATTTTTGTGAA
GTTGTGGGAATGAATGGAAGTGAATTAGGTGAAGGAAGTATGAAAATGGAGGTAATAGAG
AAGGAGAAATTAGTGTATATGTGGGGGTATTTACCGGGAGCTATGCCGCAGAGGTCGCCG
TTGTTGTCTCCGATTATTGTGGATGTTCCACAGCAGGGGATTGTTAATGCAGGAAATTAC
TCATGGAAGGATGTATGTGGTGGTGGTTGTGGATTTGCTATGGCTATTTCAGATTCTGGA
AAGATCATTACTTGGGGTTCAACTGATGATTTAGGACAATGCTATGTGACATCAGGGAAA
CATGGAGAAATTCCGGAGCCTTTTCCCCTTCCTGATGAAATTTCTATAGTTAAAGCCGCA
GCGGGTTGGGCACATTGTGTTGCTGTTACAGAAACTGGAGAAGTTTATACATGGGGGTGG
AAGGAGTGCATTCCTTCTGGAAAGTTTCTTGGGGAGCAAGCCGTAGACAAGGAGGTAAGC
GACGGGCAGAGTTCATTCCCGGCACAGCAAGTAAGCCGTCACCCCCAGGGATCGAGATCC
AAGGTTGGAGCAGCACCTGGTATAGAGACTAGAGGGGGAGAGGATGGTGCAAAACGTAGA
CGGGTATCATCAGTGAAGCAACCAGCTGAGAGTTCATCCCCAGGTGATGAAGGTCCCTCA
GCATTGCCATGTTTAGTCACACTGAATCCAGGGCTGCGGATTGTCAGTGTAGCAGCTGGT
GGGCGGCATACACTAGCATTATCAGATATAGGACAAGTGTGGGGTTGGGGCTATGGAGGG
GAAGGACAGCTTGGCCTAGGCTCCAGGATTCGAATGGTGTCCTCCCCACATCCTGTGCCA
TGCATTGATTCTTCTTCTTTGCGGAAAGACAGAGCTATGGGCCTTTCTCATGGATGTCCG
GGGTCAGAGGGACAAGGCCTCAGAGTTCCTGGGAATTACATCAAGAGAATTGCCTGTGGG
GGCCGACACAGTGCAGTAATTACAGGTAGATGCTGGAGCACTGTTAACTTTTGGTTGGGG
ATTGTATGGACAGTGTGGTCAAGGGAGTACAGATGATGAGTTAAGTCCCACGTGTGTATC
TTCATTACTTGGCATCAGGATAGAAAGTGTAGCTGCAGGGCTCTGGCACACTGTATGTAT
TTCTGCTGATGGTGATGTATATGCATTTGGAGGGAATCAATTTGGGCAGTTAGGCACTGG
TGCCGAGCAGGCTGAGACACTACCTCGGCTCCTGGATGCTCCAAGTTTGGAAAACATGCA
TGTGAAAGTTGTATCTTGTGGAGCACGTCATACTGCCGTAGTCACAGGTGATAGCAAAGT
ATTCTGCTGGGGGTGGAACAAGTATGGTCAGCTTGGACTGGGTGATGTGATCGATCGAAA
TATTCCATCCCAAGTCTCAATGGATGGTCATGTACTGACAAATGTCGCTTGTGGATGGTG
GCACACACTTCTACTAGCTGAATCACCAACTTGAACTATTACTCATCTTATTGATGCAAA
TTCACCAGTTTTGCTAGGCTAGGTGCCTTTGGTTCTCTATTCAAGATATGATATATGCAT
ATGGTACATATAGTAGTTTGCTTGCATATATAAATTCTTTAGTTGCAAGAATAAGGTGGT
CATCGTCATCCTACCAAGGCAGCAACATGCAAAGAAAGATATCGTCTACCTATCGTGTCA
TGTCAATTTAGGATACAGTGTAAATCCTCTTCGCTACTGGATTTTCTGATGTATCGAAGA
TACTCTGGTATTGTTTGTTAGAGCAGCAACTATTATAGCTTTTGGGGGTACTCTTTTCGG
GTTCAGACGTTGTTAGACTGTTGTAATTTATCAATCTTGTGTCTCTGATGTTTAGAGTTT
GTGCATGTATATAATGGTGGTTTGAAAATTTTATGGGCAAGTTTCAG