Microarray Probes on PGSC0003DMT400069927
Probe ID | Chip | Probe Sequence |
---|
CUST_30327_PI426222305 |
JHI_St_60k_v1 |
TTTAAAGGCAATAAAGATCAGATATTTGAATGATCCCAGGAACATTCCCTTCTTCATGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069927
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069927 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G39830.1 |
+3 |
0.0 |
643 |
347/511 (68%) |
DA1-related protein 2 | chr2:16619950-16623658 REVERSE LENGTH=528 |
Transcript Sequence (2114 bp)
>PGSC0003DMT400069927 2114 pgsc_dm_v3.4
GCCGTTCAAAATTGCAGCTTGCCACTGCCAGTGTTTACCTTTCCATCACAATCCTTCTCA
GCAGATTCCCAAATTTCCTCTTTCTGTTCAAGCCAAGAATCTTTCTCTCACACAAGATTC
TCATAAAAACTTAGGCTTTATACATGATGCCATTGTTCCATTTCTTTTCTCTATACACCC
TTCTTTCTCATTCCTACTTTGTCCTCTTCATTTTTAAGCCACCCTTTTCAAATCTTGAAA
AATCTCAACAAATTTCTTCTGTTTCTATACATATCGCAGTATCCTAATCAATGTCTTCTT
CAAGTGTCAATCATATATCTCAGCCTTGCATATATGGTCACTTTGTTTCTTCAACTACTG
AGAGAAAGTCAAGATTAATGAAATGGCTGAGTAAACTTTTCAAGGGTGGTGGGTCAGGTA
ATAGGAGACAGCAACCACAGTTTCTTGGAGACGAAAATATGGTTTGGCGAGCTCCAGCCA
GATCAATGGATGATAACTCTAGGACCAATAAGGAGAAAGAGGAACTAGACCGTGCAATTG
CACTCTCTCTTGCTGAAGATTTGAAAAGACCAAAAGGATACAGATGGAGGACTGACCAAG
ATGAAGATCTAGCAAGATCGCTTCAAGATAACTCGAATTCATCCTCATATCCTCCTAAGT
ATGCTCCTTCATATGCTCCTTGGGAATATAATCCCAATAGTTACAGAAAATGTAGTGGCT
GCAATAAGGATATCGTCTCTGGCAATTATTTGGGATGCATGGGAACTTTCTTTCATCCAG
AATGTTTTCTTTGTCGTGCTTGTGGTGTCCCAATTACTGAATACGAGTTTTCTTTGTCAG
GGAACAATACATATCATAAGTCATGCTTCAAGGAAATGACTCATCCAAAATGTGAAGTCT
GCCATCAATTTATCCCAACAAACGGAGCTGGCTTGATCGAGTACAGATGCCATCCATTTT
GGTCTCAAAAATATTGCCCTGCACATGAGAATGACAATACCAAACGGTGCTGTAGTTGTG
AACGTCTGGAGTCACGGAATGCAAGATATATGTCACTTGGAGATGGTCGGAGCTTATGCT
TAGAGTGCATGGAATCTGCAATCATGGATACCGGGGACTGCCAGCCACTTTACCATTCCA
TCAGAGACTATTATGAAGGCATGAACATGAAAATAGATCAGCAAGTTCCTATGCTTCTTG
TTGAAAGACATGCCCTTAATGAGGCCATTGAAGGGGAGAAACATGGTCTCCATCATATGC
CTGAAACCAGAGGTCTATGCCTATCAGAAGAGCAGACAGTCACCAGTATACTCAGAAGGC
CAAAAATAGGTGGTCGTGGATTAATAGGAATCAGAACACATCCTCAAAAGCTAATTAGAA
GATGTGAAGTTACAGCTATCCTAGTAATATACGGCCTTCCAAGATTACTTACTGGTGCCA
TTCTAGCTCATGAACTGATGCATGCCTGGTTACGTCTAAAAGGATATCGTAATCTCACCC
CTGAAGTAGAAGAAGGAATCTGCCAAGTGCTTTCCCACATGTGGCTTGAATCAGAGGTAG
TGCCTGGATCAAGAAATATGCCATCTACATCAACTGCTTCGTCATCGTCTACATGGTCAT
CATCGAAGAAAGGAGGAACATCTCAAGCAGAGAGTAAGCTCGGTGAGTTTTTCATGCACC
AGATTGCCCATGATGCTTCTCCAGCATACGGTGGAGGATTTAGAGCTGCTTATGCAGCCG
TGAATAAGTATGGTTTACGGAGTACATTGGATCACATTCGCTTGACAGGAAATTTTCCTT
TATGATATGTTCGTTGTGACCTCTTTGACCTCGTATGCTCGTAGATGATTTCCTCTCCTG
TGTGCCAAGTTAGAAGTCATCGATGAGGAAAATGAGTTGATCATGCAGAGCTGGTTTAGC
TACCCCTATTTTTTCCGGGGTCCTACCGGAGATACTGATGGAATACAACTTGAATCTTAC
AAATAAGTCTACATATTTTGCAATTAAAATGAAATATATAGAAAATTCTATCTTGTATTG
GAGACTCTTATCAGTTTAAAGGCAATAAAGATCAGATATTTGAATGATCCCAGGAACATT
CCCTTCTTCATGCA