Microarray Probes on PGSC0003DMT400069926
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30313_PI426222305 |
JHI_St_60k_v1 |
TTTAAAGGCAATAAAGATCAGATATTTGAATGATCCCAGGAACATTCCCTTCTTCATGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069926
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069926 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G39830.1 |
+2 |
2e-179 |
356 |
199/262 (76%) |
DA1-related protein 2 | chr2:16619950-16623658 REVERSE LENGTH=528 |
Transcript Sequence (2200 bp)
>PGSC0003DMT400069926 2200 pgsc_dm_v3.4
GCCGTTCAAAATTGCAGCTTGCCACTGCCAGTGTTTACCTTTCCATCACAATCCTTCTCA
GCAGATTCCCAAATTTCCTCTTTCTGTTCAAGCCAAGAATCTTTCTCTCACACAAGATTC
TCATAAAAACTTAGGCTTTATACATGATGCCATTGTTCCATTTCTTTTCTCTATACACCC
TTCTTTCTCATTCCTACTTTGTCCTCTTCATTTTTAAGCCACCCTTTTCAAATCTTGAAA
AATCTCAACAAATTTCTTCTGTTTCTATACATATCGCAGTATCCTAATCAATGTCTTCTT
CAAGTGTCAATCATATATCTCAGCCTTGCATATATGGTCACTTTGTTTCTTCAACTACTG
AGAGAAAGTCAAGATTAATGAAATGGCTGAGTAAACTTTTCAAGGGTGGTGGGTCAGGTA
ATAGGAGACAGCAACCACAGTTTCTTGGAGACGAAAATATGGTTTGGCGAGCTCCAGCCA
GATCAATGGATGATAACTCTAGGACCAATAAGGAGAAAGAGGAACTAGACCGTGCAATTG
CACTCTCTCTTGCTGAAGATTTGAAAAGACCAAAAGGATACAGATGGAGGACTGACCAAG
ATGAAGATCTAGCAAGATCGCTTCAAGATAACTCGAATTCATCCTCATATCCTCCTAAGT
ATGCTCCTTCATATGCTCCTTGGGAATATAATCCCAATAGTTACAGAAAATGTAGTGGCT
GCAATAAGGATATCGTCTCTGGCAATTATTTGGGATGCATGGGAACTTTCTTTCATCCAG
AATGTTTTCTTTGTCGTGCTTGTGGTGTCCCAATTACTGAATACGAGTTTTCTTTGTCAG
GGAACAATACATATCATAAGTCATGCTTCAAGGAAATGACTCATCCAAAATGTGAAGTCT
GCCATCAATTTATCCCAACAAACGGAGCTGGCTTGATCGAGTACAGATGCCATCCATTTT
GGTCTCAAAAATATTGCCCTGCACATGAGAATGACAATACCAAACGGTGCTGTAGTTGTG
AACGTCTGGAGGTACGGATGTCAGTTGACAGTAAACATGTTGGATCACACCTCTCATTCA
ACTCACATTCTCGTTTATTGTTTTTATCTTCTTGAAGTCACGGAATGCAAGATATATGTC
ACTTGGAGATGGTCGGAGCTTATGCTTAGAGTGCATGGAATCTGCAATCATGGATACCGG
GGACTGCCAGCCACTTTACCATTCCATCAGAGACTATTATGAAGGCATGAACATGAAAAT
AGATCAGCAAGTTCCTATGCTTCTTGTTGAAAGACATGCCCTTAATGAGGCCATTGAAGG
GGAGAAACATGGTCTCCATCATATGCCTGAAACCAGAGGTCTATGCCTATCAGAAGAGCA
GACAGTCACCAGTATACTCAGAAGGCCAAAAATAGGTGGTCGTGGATTAATAGGAATCAG
AACACATCCTCAAAAGCTAATTAGAAGATGTGAAGTTACAGCTATCCTAGTAATATACGG
CCTTCCAAGATTACTTACTGGTGCCATTCTAGCTCATGAACTGATGCATGCCTGGTTACG
TCTAAAAGGATATCGTAATCTCACCCCTGAAGTAGAAGAAGGAATCTGCCAAGTGCTTTC
CCACATGTGGCTTGAATCAGAGGTAGTGCCTGGATCAAGAAATATGCCATCTACATCAAC
TGCTTCGTCATCGTCTACATGGTCATCATCGAAGAAAGGAGGAACATCTCAAGCAGAGAG
TAAGCTCGGTGAGTTTTTCATGCACCAGATTGCCCATGATGCTTCTCCAGCATACGGTGG
AGGATTTAGAGCTGCTTATGCAGCCGTGAATAAGTATGGTTTACGGAGTACATTGGATCA
CATTCGCTTGACAGGAAATTTTCCTTTATGATATGTTCGTTGTGACCTCTTTGACCTCGT
ATGCTCGTAGATGATTTCCTCTCCTGTGTGCCAAGTTAGAAGTCATCGATGAGGAAAATG
AGTTGATCATGCAGAGCTGGTTTAGCTACCCCTATTTTTTCCGGGGTCCTACCGGAGATA
CTGATGGAATACAACTTGAATCTTACAAATAAGTCTACATATTTTGCAATTAAAATGAAA
TATATAGAAAATTCTATCTTGTATTGGAGACTCTTATCAGTTTAAAGGCAATAAAGATCA
GATATTTGAATGATCCCAGGAACATTCCCTTCTTCATGCA
