Microarray Probes on PGSC0003DMT400069678
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16634_PI426222305 |
JHI_St_60k_v1 |
GTTGTATTCTTGTATGCAAATCAAAATACTCTGGGCAGAGGATAGACAAACCATTATATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069678
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069678 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G62270.1 |
+3 |
0.0 |
1059 |
535/707 (76%) |
HCO3- transporter family | chr3:23042528-23045633 REVERSE LENGTH=703 |
Transcript Sequence (3558 bp)
>PGSC0003DMT400069678 3558 pgsc_dm_v3.4
GTGACTCACCTCTCACTTTGTTCAAGCAAATAATCCCTCAACCGTAGAGAAGCTTACTTC
CATCAGAACTTCCATCAGCAACCCACCCACCCCCATTCCTTCTCCATATCTGCATTGAGT
TTTCTTGGTACATTTTGTTAACTTCCTATTCATTTTCTTCTGTTACTTTGTTCTATTGAC
TCATGTAAACTGGTTATTGCTCTCCTCAAATAACTAACTTTCCTGCCTAATTGTTCTTCA
AGGGTTCTAAATCTAAGTAATGTAATAGTAAAAAGCTACTATCTTTGGTACCCCTTTTGT
TTAAATCATTCATTTTCAACTTCTTGATAATGGGTTCTCGTTAAATCTCTTGATTATTGC
TTTCTTGATATACCCATTTGGTTGAACTTGCTTTAAACCACTAAAAATCACTTTTTTCTA
TAAATGGGGTCTCGCTAAATTCGTGATTCTTGGTATTTTTGTCACCAAATAGCTTTGTCA
GATAGTAATAAAGTTCTGACATGTAACTGAAAATTAGATCCCTGTTTGCCCTTTGTTCTT
GTTGAAGTGCATTTTGGTGGCAACTTGTATTCTCTATTTATACATGTAATGGATCTAGAG
CTTTTCGGAGTCAACCGTTAATTCGAGATCTTTGTAGATGGAGTACTTCATTTCCTTTCG
TTAAGGCTTGATTTTTTATATCAGTTATGGCTTTACTCCGTTAAATTTATATGAGTTGTG
GTCCTATGGAATTCAAATAGGCTTGTTTGGAGGTCTTTGACATATCTCTAGACATATAGT
ATTCATTGCTAACTGATTCTTTTGTTCTATACTAACTTGTATTCTTTGTAAATCTGTTAA
TATGTAGAGTTAGATATATAACATCTTATTTTATGGACCTTAATGAAGGTCAGTATACAG
TTAACTTAAATGAATCAGCCAATAATCTGTTTTATCCTAAACACTCTAGTCATGATCAAG
TAGGTGTTGTTGTCTTCCTGCCCAAAGTTTTTTTCCCTTTGCCTATGCAAGTCTAGTTGA
GTTTGATATTGGCCTCTCGAGCCCCTTCAATTCTGTTTTAGTTTGTTGTCCTTCAAGTTT
TCTTATCTGTCAAAACGAAACAAAAAAGAACGAAATTTCCACCCTTCATTCCGGACAAAT
TTTGAGTGATCATGGAAGAAACATTTGTTCCCCTACGTGGAATCAAGAATGATCTCAAGG
GGAGATTGTTATGCTACAAGCAAGACTGGACTGGTGGTCTCCGTGCTGGTATCAGGATCT
TAGCTCCAACGACCTACATTTTCTTTGCATCAGCAATTCCAGTTATTTCATTTGGGGAGC
AACTGGAAAGAAGCACCGATGGAAGTATAACTGCGGTGCAGACTCTTGTTTCAACAGCAC
TTTGTGGTGTAATCCATTCCATTCTTGGTGGACAGCCACTCCTTATACTAGGAGTAGCTG
AGCCAACTGTCTTGATGTACACTTTCATGTTCAACTTTGCGAAAGATCGGAAGGATTTGG
GTCCGAATCTCTTTCTAGCCTGGACAGGATGGGTTTGTGTTTGGACCGCCTTTCTGCTTT
TCTTGCTAGCCGTTCTGGGGGCGTGCTCCATAATAAACAGATTTACACGTCTGGCTGGTG
AATTATTTGGCATGCTCATAGCAATGCTCTTTATGCAAGAGGCTATTAAGGGTTTGGTGG
AGGAGTTTGGCATACCTCAAAGAGAAAATCCTCGTCAGGCTGCATTCTCACCTTCTTGGC
GCTTTGGAAATGGAATGTTTGCACTAGTTTTATCTTTCGGGCTTCTTCTTACTGCACTGA
GGAGCCGTAAAGCTAGATCCTGGCGCTATGGATCAGGCTGGTTTCGAGGATTTATAGCTG
ACTATGGTGTCCCACTAATGGTGCTTGTTTGGACGGCTGTATCTTACATACCAGCCCGTG
ATGTTCCACAAGGGATACCACGGAGGCTTTTCAGCCCCAATCCATGGTCACCTGGAGCTT
ACTCAAATTGGACAGTTATCAAGGAAATGATGCATGTTCCTCCTCTATATATTGTCGGAG
CGTTTATCCCAGCCACAATGATTGCTGTCCTTTACTATTTCGATCACAGTGTTGCATCTC
AACTTTCCCAACAAAAAGAGTTCAATCTAAAGAAACCTTCCTCGTATCATTATGACCTCC
TTCTTTTGGGCTTCTTGGTCATAATATGCGGTCTTCTTGGCATTCCTCCTTCAAATGGAG
TCATTCCACAATCTCCAATGCACACAAAAAGCTTGGCCACTCTGAAACATCAGCTTTTAC
GGAATAAACTTGCATCAACAGCGAGAAAAAACATTGATAAAAATGCAAATCTTGGTCAAT
TATATAGGAGCATGCAGGAAGCTTACAATGAGATGCAGACCCCCCTTGTGTATCAAACTC
CTTCTGGCCTGGGGTTGAAAGAGCTAAAAGAGGCCACAGTTCAACGGGCATCGAGTACCG
GGTACATAGATGCACCAGTTGATGAGACAGTCTTTGATGTGGATAAGGATATTGATGAGC
TCTTACCAGTAGAAGTCAAAGAACAGCGTCTAAGTAATCTCCTTCAGGCGTTAATGGTTG
GTGCTTGTGTGGCTGCTATGCCTATCTTGAAAAGGATTCCTTCTTCTGTTCTCTGGGGAT
ACTTTGCTTTCATGGCAATAGAGAGCTTGCCAGGAAATCAGTTTTGGGAGAGGATATTAT
TGCTTTTCACTGCACCAGGTAGAAGATACAAGGTCTTGGAAGATAATCATGCAACATTTG
TCGAGACGGTACCTTTCAAGACAATTGCCTGGTTCACCTTGTTTCAGACAGTTTATTTGC
TCCTATGTTTCGGCATCACATGGATACCAATAGCTGGTGTTCTTTTTCCTTTGTTGATCA
TGCTTCTAGTCCCAGTGCGCCAGTATTTGCTTCCCAAGTTTTTCAAAGGAGCACATTTAC
AAGATCTAGACGCTGCAGAATATGAAGAAGCCCCTGCAATAGCATACAACATGTCCTATG
GAGATCAAGAACCAGTCTGCATTGATGGTGGTGAGCTTCTTGATGATATGATCACAAGAA
GCCGTGGGGAAATCCGGCGCTCATGCAGCCCAAGAGTAACGAGTTCAACTCCCACCTCCC
TTGAGGAAATCAAGTCAACACACAGCCCACAGCTATCTCAAAGGGCTTATAGTCCAAGAA
TCAATGTACTAAGAGGAGAAAGAAGCCCCATATATGGCAAGGGACTTGAAATAAAGCAAA
CTCCCAGCCCTCAGCCATCTAAACTTGGTCAAAATGATCGCGGTCCGTCTTCCACCTAGT
ATTAACAAATATTGTTGTGAAATTAGAGTCTCTAGTTGTTCTCGAGAGGTCTTGTCTAAG
TCTAAGTAATGTGATTAATCTTTTCCTAGGCATCTGTGTTTCCTTGTTTGTGTGTCTTAC
TGGTCTTTAACAATGTATACTGTTTTATTTGTGTTGTATTCTTGTATGCAAATCAAAATA
CTCTGGGCAGAGGATAGACAAACCATTATATCAATGAATAAAAGAGTGAAAATTTTCTCA
AGTACAGCTGCTTTTGTC
