Microarray Probes on PGSC0003DMT400069641
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16821_PI426222305 |
JHI_St_60k_v1 |
GCAATTCGTTGTTCTGCGCCTGAATGCTGATGTTTGTTTTTCTTTCGAAAATAATATTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069641
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069641 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G63130.1 |
+3 |
5e-33 |
123 |
62/110 (56%) |
Octicosapeptide/Phox/Bem1p family protein | chr5:25323190-25323857 FORWARD LENGTH=192 |
Transcript Sequence (1027 bp)
>PGSC0003DMT400069641 1027 pgsc_dm_v3.4
AATTTCAGCTTTCTCTAGAAGTTTCTTTTCATTCTTCGGAGCACAATTTCCGCTTTCAAT
TAATCTCTTCGCACTGAATTCGGACCATGAGTCACTCTAGACAAATCGTCAAATTCCTCT
ACAGTTATGGCGGTAGAATCCTTCCTCGTCGCTCCGACGGCACGCTCCGTTACATCGGCG
GCTTTACTAGAGTCCTCTCCGTTGATCGATCTATTTCAGTTGCAGAGTTGATGGTGAAGT
TTGGAGAATTGTGTGGATCGTCTATGCATTTAAAATGTAAGCTGCCGACTGAGGATTTGG
ATGTTTTGGTATCGATAACCTGTGACGAGGACCTGGCGAATGTGATTGAAGAGTACGATC
GAGTTTCAGCAATGACGAATACAGAGATTAAGATTAAGGCGTTATTGTCTCCAATCAATT
TGCCGAAAAAGAAATCTCGTCCGTCTTCGCCAATGTCTTGCTTCGATTTCCCGGCATCGA
ACTTGAAGCTTGGAAAACTCGGCCGGTTCAATTCGCCTCCGTCGTATGCGGCGCGTAGAT
TGTTCTCACCAGTTGTGGGTTATCCGATCGGGAGACGGACAGATCGCGAGGAGCTTTACT
ATCCTTAATGTGGACACGGAGGCGTTAGGCAGAAGTATAACGTTGTTCCTATCCATTGCC
AATAGAAAAAAGATACCCGAGAGATAAGAGTAGTTAACAGTATTGCAGGAGAGTAGATGA
AACGAATCTCCTCCCCATAAAGAAGGGACAGATAAAGAAAATATTTATCACATCAAATAG
CAAAGAACAGATTCAATATAATATTTTGGTGCCTGAATCAAATTGTATATTACTTGAGAT
TATTGTTCGTTCAATTGTGAGGTGGATTTAAGATTCGAGCTGATATTGTTATCTAATTTC
TGTGGATTCTTTGTTCGTACACTCCGTATAGACATTTACGCTGTTAGGGTTACTGGTAGG
CGTAGGCAATTCGTTGTTCTGCGCCTGAATGCTGATGTTTGTTTTTCTTTCGAAAATAAT
ATTTCTA
