Microarray Probes on PGSC0003DMT400069547
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16593_PI426222305 |
JHI_St_60k_v1 |
CACGATTTACGCTAGTTTGTTATTCGAATTTGAGCAGGTCATTATGTATCAACTATGGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069547
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069547 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G17720.1 |
+2 |
3e-95 |
294 |
166/271 (61%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:9862660-9864498 REVERSE LENGTH=313 |
Transcript Sequence (1425 bp)
>PGSC0003DMT400069547 1425 pgsc_dm_v3.4
AATATCTCTCCCTCAATATTCGTTTGGCCTTATTGGAAACAAACATTTGCCAACTTTTGC
GTACAACACGTTCTATTTCTAACTCCTCCATCTTTTACCCCTTTTGGATTCTTCCTCCAA
TTTTGTTTCCTTCTATTCTTCTCTGATTAATCTGCTATTTTTTTAATCTCGATCGATGAC
GGTTAAAACAGTGCAAGTGAACAATGTTTCTTTGGGTGCTAAAGAGCAAGATATCAAGGA
GTTCTTCTCCTTCTCTGGGGATATTGAATATTTAGAGATGAAAGGTGAGAGTGAGCGATC
ACAAGTTGCTTATGTAACATTCAAGGATCCTCAGAGTGCAGAGACTGCAGTTCTTCTTTC
AGGAGCTACAATTGTTGATCAGTCCATCTCAATAGTCCTTGCACCCGAGTACAAGCTCCC
ACCTACAGCTTCAGTATCACCAGTTCCAACTGAAAGCACCAATGCACCCGCTGCTGGATC
TGCTATTCAAAAGGCAGAGGACGTCGTCAGCAGCATGTTGGCAAAGGGCTTTATCTTGGG
CAAGGATGCAGTTGGCAAAGCCAAGGCACTAGACGAGAGACACAAGATCACATCCACTAC
CTCAGCCACAGTTGCTTCTTTAGACCAAAAATATGGCCTTAGTGAGAAAATAACTACAGG
AGCAACCATTGTGAACCACAAAGTGAAAGAAATGGACCAGAAATTCCAAGTCTCGGAAAA
GTCAAAATCTGCTTTTGCAGCTGCTGAGCAGACAGTTAGCAATGCTGGATCCGCCATCAT
GAAGAACAGATATGCTTTGACAGGGGTAACTTGGGCTGCAGGTGCCTTAAGTCGAGTCAC
TAAGGCTGCCGGGGAAGTGGGACAGAAGACAAAGGAAAAACTGGCTGAAGAAGAAAGAAG
AACTTTTACTAAAGGTCATGCACAAGAAAATACTGCAACTTCATCAAAAGGTAATGTGCA
ACAACAAGCTGCAGATTCCGCTAAAGGTGATGTCCAAGAACTTGCTGCAGCTTCTGCTAA
AGGTGATGTGCAAGAACTTGCTGCAGCTTCTGCTAAAGGTCATGTGCAAGAACATGCTGC
AACTTCTGCTAAAAGTGATGTGCAAGAAGTTGCAGCAACTTCTGCAAAACAAGAACATCC
CGAGTCCCAAACCGGAATTGAGGAATCTACCAATCTCTCTCTTCCACCAAAAGCTTAATC
CAACATTATCTTGAAAGTAAATGCACGATTTACGCTAGTTTGTTATTCGAATTTGAGCAG
GTCATTATGTATCAACTATGGTATTTATACATGGAATCTTATTTCTTATGTATGTTGGGA
CCTAAAATATGATATAATGAACATCATTCTTGTAGGAGATTTATTTTTTTCTAACAAAAA
AAGGGATTTGCAAGAGATGAGATCAATTACTATTTCAATATTGCA
