Microarray Probes on PGSC0003DMT400069546
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16659_PI426222305 |
JHI_St_60k_v1 |
CACGATTTACGCTAGTTTGTTATTCGAATTTGAGCAGGTCATTATGTATCAACTATGGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069546
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069546 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G16840.2 |
+3 |
3e-56 |
195 |
118/207 (57%) |
binding partner of acd11 1 | chr5:5536042-5538026 FORWARD LENGTH=260 |
Transcript Sequence (2629 bp)
>PGSC0003DMT400069546 2629 pgsc_dm_v3.4
TAGAATGGGAATATTGAAGTGTCCCTACAGCAAAATTCTGAGAATAGCATTAAGTAGGTT
AGCTCACAGTTTGTGGCTTTGTGCTTTTGTGGTTGTCCTGAATAATTCCATCTATGTGAG
ATAAATTCAGATTCTCTTTCACATTTATGAGATTGCTAAGTTTTCTAGGTTAAGAAAAAA
TGGATACTGCTTATGTTGAGGAACATCAAAGGATCAGCTGCCCTAAGGGGCGACAATTTG
CTTCACGTTTGTACTGTTTCTCTTGGTTAAACTGTCACTTGTAAGCTTGTGAGACCGTTA
ACTGGGGAGCTTTAAGAGCTAATCCATCTATTTACTTGGATAAGTACTTCACACACCACT
GCTGGTTGGTATCTCCTTTTCAATTAGGTTTCTTCACTCGGAGCCTTTTCTTTCTGTAAG
AACAATAGAAGTTCCAAAGTGGTCCCATATAAACTACAGTTGATTCAGTTGATCAGAGTC
GTCACATAACTTTGGTTGTTCCCAACATAGACAAATGTTAGCATTTTTGGCCAACGGGGG
GTGAGGGAGATAAAGTTTCATTCCTCATTTCATATTAATACAAGGAGCTTACGATAAAGA
AATGAACCGTGGGCCTAACTCAATCCAAAAATTAGTTCATGAGGTGGGCAAATAAGTAAA
CAAACAAACTCATCCCTCAACCCAATGTGGGATTCTTCCGTATGAGGTGAGGATTGCTCA
GGACCAAATAAGTAGACAAACAACTCATCCCTCAATCTAACGTGGGGAGCTTCTGTATGA
GCTTCCAGTTTTCACCTCCTTTAAGTGTTTTTCGGTTCGGTAGCATTCATTGTTGTCTGT
ATCTTGACTTGGTGAGTTCTGGATTTTCTCTGTCGTTGTTGATGTTTATTTCTTATTAAT
TTTTTTTTTTGTGCACGGCTAGGTTTCAGTTTGTCTTTCTTCGTTTTTTCCTTGATGTGT
AGGGGAGGGTGGAGAAGGATTATATTAGGCAGATGACAAAAGTGCTTAAAGTCTTGAAGC
TCCCCATTTCTGCCAGAGAATAGTTCAAAGTAGCTAGCGAAATCATAAAAGCCTAGGTCC
ATGTTACTTGTGTGTGGCCTTCTTACTTCAGCATGATGGCTTTAATAGAACGATCAACAT
ACCTCTAGGGGAAATTGCAGTGTGAAAAGTCTTATTGACAATTTTTTTTGTGGATACTCT
CACTGTTTTAGTATTTAATGTCAGATTGCTCAGATGTTACGGAGAGTAAGGGAACTATCC
TATACTTAAAAAGTCAATACTACCATTGTTTCTCTTCTTCTTCAATCCACTTGAAGTCTT
GTAACAGAGATACAGATAAAGTGTATTCTAGCATAAGTATTGTTGGTTGTTCACATAGCT
TAAGTGTTGCTTGATTACAAGGATGAGCTGTTTCCAATTTGTGACTGTTCCTTTACTGCT
CCACTTTTGCGATTGATAAGCTCACTTGGTGTTTTTAGGGAGCTACAATTGTTGATCAGT
CCATCTCAATAGTCCTTGCACCCGAGTACAAGCTCCCACCTACAGCTTCAGTATCACCAG
TTGTATGTATAACTTTATGTTTTAAGCAGACTTTCCGGCTTCATCCATCACATGATTGTC
CATAAATGGTGTACTGTTTATATGTGCAGCCAACTGAAAGCACCAATGCACCCGCTGCTG
GATCTGCTATTCAAAAGGCAGAGGACGTCGTCAGCAGCATGTTGGCAAAGGGCTTTATCT
TGGGCAAGGATGCAGTTGGCAAAGCCAAGGCACTAGACGAGAGACACAAGATCACATCCA
CTACCTCAGCCACAGTTGCTTCTTTAGACCAAAAATATGGCCTTAGTGAGAAAATAACTA
CAGGAGCAACCATTGTGAACCACAAAGTGAAAGAAATGGACCAGAAATTCCAAGTCTCGG
AAAAGTCAAAATCTGCTTTTGCAGCTGCTGAGCAGACAGTTAGCAATGCTGGATCCGCCA
TCATGAAGAACAGATATGCTTTGACAGGGGTAACTTGGGCTGCAGGTGCCTTAAGTCGAG
TCACTAAGGCTGCCGGGGAAGTGGGACAGAAGACAAAGGAAAAACTGGCTGAAGAAGAAA
GAAGAACTTTTACTAAAGGTCATGCACAAGAAAATACTGCAACTTCATCAAAAGGTAATG
TGCAACAACAAGCTGCAGATTCCGCTAAAGGTGATGTCCAAGAACTTGCTGCAGCTTCTG
CTAAAGGTGATGTGCAAGAACTTGCTGCAGCTTCTGCTAAAGGTCATGTGCAAGAACATG
CTGCAACTTCTGCTAAAAGTGATGTGCAAGAAGTTGCAGCAACTTCTGCAAAACAAGAAC
ATCCCGAGTCCCAAACCGGAATTGAGGAATCTACCAATCTCTCTCTTCCACCAAAAGCTT
AATCCAACATTATCTTGAAAGTAAATGCACGATTTACGCTAGTTTGTTATTCGAATTTGA
GCAGGTCATTATGTATCAACTATGGTATTTATACATGGAATCTTATTTCTTATGTATGTT
GGGACCTAAAATATGATATAATGAACATCATTCTTGTAGGAGATTTATTTTTTTCTAACA
AAAAAAGGGATTTGCAAGAGATGAGATCAATTACTATTTCAATATTGCA
