Microarray Probes on PGSC0003DMT400069511
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16561_PI426222305 |
JHI_St_60k_v1 |
ATTCTGATCAGGGTGGAGCAGATCATGAAGGACTGTCAACTGTATCTGAGAGTGAAAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069511
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069511 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G49530.1 |
+2 |
9e-79 |
264 |
162/343 (47%) |
NAC domain containing protein 62 | chr3:18362639-18364717 REVERSE LENGTH=469 |
Transcript Sequence (2346 bp)
>PGSC0003DMT400069511 2346 pgsc_dm_v3.4
TACACATCGCCCCTTTTATTCATTTTCTCTACTAAGAATCAGCCCTTTTGTCGATTCAGC
TTACATCATCTAGTTTTGAGAAAAATTCAATCTTTTCTGTGTTAAAGTTTGGATCTTTGT
AATGACTGTACCTCCGGTGGGCAATCAGGTGGAAGTTCCACCGTTGAATACTTTACCGAT
TGGATATCGTTTTCGGCCCACGGATGAGGAGCTTATCAATCATTATTTGTGCTTGAAGAT
CAATGGTTGTCATAACCAAGTGGATGTTATTCGTGAAATTGATATCTGCAAATTCGAGCC
CTGGGATTTGCCTGATTTGTCTGTTGTAGAGTCAAATGACAATGAGTGGTTGTACTTCTG
CCCGATAGACAGGAAGTACCAAAATGGGCAGCGATTGAACCGAGCAACAGAACGAGGATA
CTGGAAAGCTACTGGTAAAGATAGAAACATAGCTACTAGAAAGGGGGCAAAGATTGGGAT
GAAGAAGACTTTGGTATACTATATTGGGCGAGCTCCTGAAGGGAAGAGGACCAATTGGGT
GATCCATGAATATCGTGCAACTGACAAGTCATTGGATGGTTCACACCCTGGACAGGGAGC
TTTTGTGCTTTGTCGTCTCTTTAAGAAGAATGAATTGAAGCAAGATGAAAATGTCGAAAG
TTCACACTTTGATGAAGTTGAACAGCTTGTTTCTTCTCCTGCTGTTGGAAAATCACCAAC
CAATGATGGATTATCAGCAGTGGCTCTATCTCCAATCATGGAAAGTGAGAGTAACAGAAG
TAACCCACCAAAAACCTCTGGAGGCAAAACTCATGACACAAGATTATCTATTAATAGTTG
TGGCAATAGTTGCACTGCTGGTGATGCTGAAGATCTGATGTTGGACATAACATCAGGACA
ATCAGATCTCCAGATAGAGGAACTGTTGGGACTCTTTCGTGACCCTTCACCAGAGCCTAT
TGATTGGTCTCCGTTGCATTCACAGTCGCAGGTGGAGTTTGGATCTTCTATCTCACATGG
TACCATGACCAATGAGATAAGCTCTGATCAAAAGGATGTCCAATGTCAGAATGGAATAAA
TGATCTCAATACTAGTGAGTTTTTAAATTCAATTCTTGTCAGCTCTGATGAGCTTTCCTA
TGAAGATTCTGAAGCGGAATTGAGGTCAATCTGGTTTGCCTCGAACAGTATTAACACTAT
AACAAGGGCACCAGTTAAGGACTCTGGAACGTGTAGTGTGTTGAAGTCACAAGTCACACA
AGAGCCAGTTAGGAGAGATTTTTTTGAACCCGAGCTGCTGTTGGGAAATTATGGAGAGAC
TGCAGTAATGAGAGAGGTTAATTCTGTTGCAACCACAGTGGACGAGGCGTTTGCAACACC
TTATGTTCGCAATGATCATTCAATGGCGAATCTGGATTTCCTTAACAATGGTTACCCTGG
AGAGGTCATTTTGTCTGCTGGTTCTGGTGGAATGCAGGTCGACAGCTCACTAAACTTTGA
TGAATCAAACGGTTATAGCAATGTAGGCACTGATTCTGCTTTTGGAATAACACGAAGGAC
TCGGCAGGTGCAGAATCAACCTGACGACAGCCAGCTGGGATCTGGAATGCAAGGAACTAC
TGTTAGAAGAATACGTTACCAAGTGAAACTTCAAGCTGGAAGAGTAGAGTGTCGCATGCC
GACTGATTCTGATCAGGGTGGAGCAGATCATGAAGGACTGTCAACTGTATCTGAGAGTGA
AAAGTTCTTCAATGAAGAAGCTTCTACTCCGAGTGCTGCTATCTGCAGCGATGAGACACA
AGATACCATGTGCAAAGAATTTAAAGGGGATTGTCAAATGGCTGAAGACTTGAGTGCAAA
TGTGAAAGATACAAATGGTTCAAAGAGAGCAGCATTGTCTTCGTTTTCATCAAGTTTCTA
CATATCCAAGGTGCTCGCGGTTGCAAGTTTACTCATGGTCTTCTTAGGTGTTTTGGGATG
CTTTAAGCTGAGACAATCTGCATCCAAATTGTAGCTTTTTGTAACTGGCTTAACATGTTT
TGTTGATTTTATCTCCTTTTCAAATACTGCAGAGGAGCTAAAGTTGAGAAAACTTAGAAG
TTACTAGTGTATATTTTATATTACAATTGACTTGTTTTGTACATTACTAGTACTATATTG
TGTAAGGAGATCTAGTTAATTTAGACTTTTTCCCAAAGATTTGCATTTGGCATTTTGACT
TCACCTCCTTCATTATTCTACCTTCCCTCAATATATATGGACATCTCCTTGGTTCTAGTC
AAGGAATTTAATAACGTCTGTCTGCTAGGTGAAGAAATTTCATATCATTATTAAGTGCAT
TTCCCC
