Microarray Probes on PGSC0003DMT400069506
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16629_PI426222305 |
JHI_St_60k_v1 |
TTTACATTCTAGTGTGCGCTTTCTTGGATCTTTGCTCATTGTGCTTCTGGTGTAAGGGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069506
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069506 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G24490.1 |
+3 |
2e-113 |
340 |
171/256 (67%) |
30S ribosomal protein, putative | chr5:8365690-8367178 FORWARD LENGTH=308 |
Transcript Sequence (1405 bp)
>PGSC0003DMT400069506 1405 pgsc_dm_v3.4
GTGTCAACCATCATCTCTTTCGGATAATGCATTTCTTCTTCATCATCATCAGTCCCTATA
TCCACTTCAGTAAAGTAACTGTGATTCTCCTTCAAACTTCACATCTTTATCAACAACGCA
CAAAATTCATCAACCCACTTCAGGTTTTACTTCTTAGATCGATTCATTGACTCAGAAATC
TCCAGCTACTGCTTCTGCAATATACAACAATGGCGACTCTTTCCCTTTCCCCTTCCGTGG
GAACAATTTTTCACTCTCTCCATAGCTACCCAACTGGTCCCTCATCCTACTCTTCTTCTT
GTCCCACTACTGCTTCTCCAGCTTTTTCACTGACATTGTCATCTAGCAATTCAGGATTTT
TAAATTCAGCTTTCAAGAAGAATGAGATTAATGTTCCAGTGAGGAATAGGGTGAAAAATT
CCTTTGGGGTTCGGATGTCTTGGGACGGTCCTCTATCTTCCGTTAAACTCATTCTTCAAG
GGAAAAACCTTGAGTTAACACCTGCTGTGAAGGACTATGTGGAAGAGAAGTTGGGTAAGG
CAGTTCAAAAGCACAGCCATCTAGCCAGGGAAGTGGATGTTAGGCTGTCTGTTCGAGGTG
GAGAGCTTGGAAAAGGCCCAAAAATTCGAAGATGTGAAGTTACTTTATTTACGAAAAAGC
ATGGAGTGATTCGTGCAGAGGAAGATGCAGAGTCAATTTATGGAAGTATAGATATGGTAT
CATCAATTATACAGAGAAAGTTGCGGAAAATTAAGGAGAAGGATTCAGACCATGGTCGCC
ACATGAAGGGCTTCGATAGGCTGAAAGTCAGGGACCCAGAGGTGCTGTTAGTTCAAGAGG
ATCTTGAAACACTTCCCCAAGAGGAAGAAGTTGAAGATGATGACAAGAGCGACGGCTTTG
TTACTGAGGTTGTTCGTAAGAAGTCCTTTGACATGCCACCTTTAAGTGTCAATGAAGCAA
TTGAACAGCTGGAAAATGTCGACCATGACTTCTACGGTTTCCGGAATGAGGAAACTGGTG
AGATTAACATTGTTTACAGACGAAAAGAAGGGGGTTATGGACTTATTATTCCAAAGGAAG
ATGGTAAAACAGAGAAGTTAGAGCCCTTGGAGGTTGAACCAGAGAAAGAACCGTCGATAG
CAGAATAAATCGATTTGGTAAAAGAGTTCTTAGTTAGTCACTGAGTACATTTGCTTAGCA
TTATGTTCACTCCTTGAGAGTCAGAAAAAACAGTATTATGAATTGAGAACATATTGCCAA
AAAAGCTTCTGTATGAAAGTAGATGTTTCTACTGTTGTGTAAAATTTGTAATTATAACTT
GAAAAAAGGAATAATGCAACTGAATTTTACATTCTAGTGTGCGCTTTCTTGGATCTTTGC
TCATTGTGCTTCTGGTGTAAGGGAG
