Microarray Probes on PGSC0003DMT400069500
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16675_PI426222305 |
JHI_St_60k_v1 |
TCCTTACTTTCCCTTTCTTGTGTGTAGTGTGATGGTTTTTATCAGAAAATGATATTCCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069500
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069500 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G70370.1 |
+3 |
9e-37 |
143 |
71/213 (33%) |
polygalacturonase 2 | chr1:26513003-26514998 REVERSE LENGTH=626 |
Transcript Sequence (1460 bp)
>PGSC0003DMT400069500 1460 pgsc_dm_v3.4
TTCAAGTCTTCCAAAAAAAAGAAATGGCTACTTCATATTGGTTCATGTTTTTCTTGTTAA
GTGTCTTGTCTTTATTTGCTTCTTCTACTTGTAATTCTATACCATATGTGGGTTCTAATG
AGCTCAAGTTTTGGAAAGAAAATGTTGTCAATGAAATGCCTCAAGCTCTTGTTTCTAAAT
TATCTCCAATGAACATGATTGACTCTAAATATTACACTTCATTAGTGTCCAAAAAGGCAT
TCTCTTTTGATGCTCAAAGTTGTTTGCTTGCTGATATATTTTGTACTTCTGAGACTAATG
CCCAAACATCCAAACTCCCAAATCAAGCCAAAGTTTATCCCTCCAAAATTCCTAATCAAG
CTAAGGTCTATACAACCAAAATCCCCAATCAAGCTAAAGTCTATGCTTCCAAACTCCCAA
ATCAAGCCAAAGTTTATCCCTCCAAAATTCCTAATCAAGCTAAGGTCTATACAACCAAAA
TCCCCAATCAAGCTAAAGTCTATGCTTCCAAACTCCCAAATCAAGCCAAAGTTTATCCCT
CCAAAATTCCTAATCAAACTAAGGTGTATACATCAAAAATTTTTGCAACTTCACACTCTA
ATAGTCATCATCTTGGAGAAGTCTCTTTCTTTAGAGTCTCTACCCTCAAACCTGGAAACA
CAGTCCATCTCGACAACTTAGTGAACCCGTTCCCTCATCGTTCATTTCTTCCTTCTCAAA
TTGCCTCAAAGATCTCCATTAACTCAAACCATCTCCAACATTTATTCCCTCAAACTTTCA
CTTCACCATTCACAAAAGATACCACAAAAACTACCATCCTCAATTGCAATGCACCTACTC
TAAAAGGAGAAGTTAAAACATGCGCGAAATCCTTAGAAGAAATGATAGAGTTCTCAAAGA
CTACCTTGAAACAAAACCACCTAATTTCATTGACAACAGATAGCATACAAGGGTCAGGAC
AGAAACTAAAAATTGAGAAATTTCATAAAATCAATTCCCAAAAGAGTGTCTCATGCCATG
AGATATTCCTTCCTTTTGCTACTTACTTTTGTCATTTGCTATCTTCAACTAATATTTACG
CGGTGGAGTTAGTTGATTTAAACACTAATGCTCATGTTAATACAGCTATGGTTGTTTGTC
ATATGGATACTTCTTCATGGCCAGCTGATCATCCAGTTTTCAAAAAGTTGAATTTTTCAC
CTGGAAAAGGAGAGGTTTGTCATTGGATGTCACAAGCTGATCTTGTTTGGGTTGGAGATG
ATGCACATGCATAAAAAAAAAAGTCTGCTGGTGCCTTTTAATTAAGCTTTGAGTTTAATT
GCAAAAATGGATCGTCTTTTTTTTTGTTTCTCTGTTTTAAGAATAGTAAGGTATTGTAAT
TATGAAAAAATAAGTCCCAATCCTTACTTTCCCTTTCTTGTGTGTAGTGTGATGGTTTTT
ATCAGAAAATGATATTCCCT
