Microarray Probes on PGSC0003DMT400069399
Probe ID | Chip | Probe Sequence |
---|
CUST_16551_PI426222305 |
JHI_St_60k_v1 |
GAGTGTTGTATCAACAAAAGAGTTGTATACAAAGTGTATAACTACTGTGTGGTAGTCTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069399
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069399 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G63160.1 |
+2 |
2e-36 |
140 |
68/102 (67%) |
BTB and TAZ domain protein 1 | chr5:25333485-25335399 REVERSE LENGTH=365 |
Transcript Sequence (1880 bp)
>PGSC0003DMT400069399 1880 pgsc_dm_v3.4
CATGAAAGATATTAAGTTAGCCATGAAATCATTACATGGCATTTGTTTGCGTCTCTTTTA
TCAGTCAAGTGGCTGTGATTAGTGATTTTGCATTGTACATTTCTCATTATAGCGGAAGAA
GAGGACAAGGAGACACAAACGGGAGCTGAGCTTGTATTTACAGCTAAGCGAAGCGATGGA
TTGTTTGGAGCACATTTGCACAGAAGGATGTACTAGTGTGGGGCCATTAGATAAAGAACC
TTCCATCAAGAGGCAGCCATGTAGCAAGTTTGATACCTGCCAAGGGCTTCAGCTTCTGAT
TCGACATTTTGCTACTTGTAAGAGAAGGACCAAAGGAGGTTGTTTACGATGCAAGCGCAT
GTGGCAGATCCTAAGATTACACGCATCCATTTGTGACCAACCAAACGATTGCCAGGTTCC
CCTTTGCAGGTAACCACCACTGACTACTGAGTAACTAATTTTTTAATCAATTCACGTATT
GTTGATCGCTTGAGAGTGAATCTCATTGATGGCAGAAATTAGAATATGTACATCATCTTA
GCGGTGTCATTGGTCGAGGCATGTCTATCTTGCTTAATTTGAATGATGGGTCCTGATCAA
TATACCCATTATGGTCTGTCATGTTCAACCTTGAAAACTTCTTAGGTGGCATGTCAGAGC
TCGGATGTTATTATAGGCGATTTGTCTCGATAGAAGAAGCCAACAAATCAGCTGTCACAT
TGATTTGTCCATATTTTTTCTCCAATTCATGATTGAGCCATTCACTATCACTTTGTTGGA
TACTATTTCTTTTCATATGGGTCTTAAATTTGTGATGTAGACAGTTACAAGGAGCTTATC
AATCCTGTACTGTCTTATAAGCTGGTCAAGATAAATCAACACTTAGTTACGGCTTAATAC
AAAATTGTTAGCTGGCATGTGATTTTGTTCAATTTTGTGTGATGATGAGTCTAATCATGA
AGATATTTTTTCCAAATTTTACTGTGATTCTAAATGCCGGCTCGGTTGAGGTCGTTCTTC
ATGTGAAACACAATCATTCAAGTAGTAATAATTGATTCATGGTCCCATATCGACTAATAC
CCAGATGCACCTGTTGTAGACGGTAGCAAAACTTAGACAGCAACATGATCTGACCTTTTG
TGATTCATTGAATGTGTCCACTTGTCCTCTTCCACAAGAAAATATCTACCAAGAGCTCGA
ATAACTTTTTGACACGTTGGGTTGGTTAAGTTCAACAAGTATCAAGCTTAAAATAACATT
GTTTGCCTTCTTTATCAGTAGGGTCAATTTGATACAGTAACTAATCATCCGTTTTTTCTT
GTTTCTGTACTTGGTAAATATCGACTCTTGAGTTTCTTACAGCTCCATATTTTACATTTC
AGACAATTCAAATTGAAGGTGCAACAAAAGGGAGATGACGAGCTGTGGAAATCACTTGTT
AGAAAGGTGGTGTCAGCCAGGGCCATGTCTTCTTTATCTCTGCCCAAAAGAAAAAGAGAA
GAGGAACCAAAAATGGACTTAAGCCATCCTCAAGTGATGAACTTTAGGTTGGCAGCTTAG
TGTCAAGTATTTCATATCGTTAGGCAAACTCGATCTTTGTAAATAGACCATCAATGGAAT
CTAAGTTAGTTTTTACCATTTCATATTTCCTACTGTAGAGGCCTATTCTATATGTTTATT
TTTTTTTCTGTGTCAGTCCTTTAGTTGATGAAGAGTGTTGTATCAACAAAAGAGTTGTAT
ACAAAGTGTATAACTACTGTGTGGTAGTCTGTTTATATCTTCATTTTGTGTAATGAAATT
AGCCATTAGTCATATCACATATGCTTCAAATACTTGTTTTCCGTGTCTTTCTACCATTTT
CTGTACATTCTAATACTCTG