Microarray Probes on PGSC0003DMT400069398
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16645_PI426222305 |
JHI_St_60k_v1 |
GAGTGTTGTATCAACAAAAGAGTTGTATACAAAGTGTATAACTACTGTGTGGTAGTCTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069398
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069398 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G63160.1 |
+3 |
3e-97 |
308 |
149/212 (70%) |
BTB and TAZ domain protein 1 | chr5:25333485-25335399 REVERSE LENGTH=365 |
Transcript Sequence (2214 bp)
>PGSC0003DMT400069398 2214 pgsc_dm_v3.4
GTTGACTTATTTGTAGCATGTTACTTACTCTCATATGGTCTAAAAGCTAATTAAAATATC
GGAAACTTAAACAGAAACTTTTAATCAGTTTAACCCTTGCAAGAATGAATGCTTAGAGTG
ACCAAATTGTCCTGGTATTTAGGTGCACTGAAGAGCAGATGAAGAGACATGGGATCCATC
TGCTAGCACTTTCTCATGTGTACTTGGTACCACAGCTGAAGCAGAGATGCACTAAGGGAT
TGGCCGAGCGATTGACGATTGAAAATGCAGTGGATGTGCTTCAACTTGCGAGACTATGTG
ATGCACCAGATCTATACCTCAAGAGTATGAAATTTTTGTCTAGCAATTTCAAGAAAGTTG
AGGAGACTGAGGGCTGGAAGTTCCTTCAACATCATGATCCCTGGCTTGAACTTGAAATTC
TACAGTTCATGGATGAGGCAGAGTTGCGGAAGAAGAGGACAAGGAGACACAAACGGGAGC
TGAGCTTGTATTTACAGCTAAGCGAAGCGATGGATTGTTTGGAGCACATTTGCACAGAAG
GATGTACTAGTGTGGGGCCATTAGATAAAGAACCTTCCATCAAGAGGCAGCCATGTAGCA
AGTTTGATACCTGCCAAGGGCTTCAGCTTCTGATTCGACATTTTGCTACTTGTAAGAGAA
GGACCAAAGGAGGTTGTTTACGATGCAAGCGCATGTGGCAGATCCTAAGATTACACGCAT
CCATTTGTGACCAACCAAACGATTGCCAGGTTCCCCTTTGCAGGTAACCACCACTGACTA
CTGAGTAACTAATTTTTTAATCAATTCACGTATTGTTGATCGCTTGAGAGTGAATCTCAT
TGATGGCAGAAATTAGAATATGTACATCATCTTAGCGGTGTCATTGGTCGAGGCATGTCT
ATCTTGCTTAATTTGAATGATGGGTCCTGATCAATATACCCATTATGGTCTGTCATGTTC
AACCTTGAAAACTTCTTAGGTGGCATGTCAGAGCTCGGATGTTATTATAGGCGATTTGTC
TCGATAGAAGAAGCCAACAAATCAGCTGTCACATTGATTTGTCCATATTTTTTCTCCAAT
TCATGATTGAGCCATTCACTATCACTTTGTTGGATACTATTTCTTTTCATATGGGTCTTA
AATTTGTGATGTAGACAGTTACAAGGAGCTTATCAATCCTGTACTGTCTTATAAGCTGGT
CAAGATAAATCAACACTTAGTTACGGCTTAATACAAAATTGTTAGCTGGCATGTGATTTT
GTTCAATTTTGTGTGATGATGAGTCTAATCATGAAGATATTTTTTCCAAATTTTACTGTG
ATTCTAAATGCCGGCTCGGTTGAGGTCGTTCTTCATGTGAAACACAATCATTCAAGTAGT
AATAATTGATTCATGGTCCCATATCGACTAATACCCAGATGCACCTGTTGTAGACGGTAG
CAAAACTTAGACAGCAACATGATCTGACCTTTTGTGATTCATTGAATGTGTCCACTTGTC
CTCTTCCACAAGAAAATATCTACCAAGAGCTCGAATAACTTTTTGACACGTTGGGTTGGT
TAAGTTCAACAAGTATCAAGCTTAAAATAACATTGTTTGCCTTCTTTATCAGTAGGGTCA
ATTTGATACAGTAACTAATCATCCGTTTTTTCTTGTTTCTGTACTTGGTAAATATCGACT
CTTGAGTTTCTTACAGCTCCATATTTTACATTTCAGACAATTCAAATTGAAGGTGCAACA
AAAGGGAGATGACGAGCTGTGGAAATCACTTGTTAGAAAGGTGGTGTCAGCCAGGGCCAT
GTCTTCTTTATCTCTGCCCAAAAGAAAAAGAGAAGAGGAACCAAAAATGGACTTAAGCCA
TCCTCAAGTGATGAACTTTAGGTTGGCAGCTTAGTGTCAAGTATTTCATATCGTTAGGCA
AACTCGATCTTTGTAAATAGACCATCAATGGAATCTAAGTTAGTTTTTACCATTTCATAT
TTCCTACTGTAGAGGCCTATTCTATATGTTTATTTTTTTTTCTGTGTCAGTCCTTTAGTT
GATGAAGAGTGTTGTATCAACAAAAGAGTTGTATACAAAGTGTATAACTACTGTGTGGTA
GTCTGTTTATATCTTCATTTTGTGTAATGAAATTAGCCATTAGTCATATCACATATGCTT
CAAATACTTGTTTTCCGTGTCTTTCTACCATTTTCTGTACATTCTAATACTCTG
