Microarray Probes on PGSC0003DMT400069306
Probe ID | Chip | Probe Sequence |
---|
CUST_16496_PI426222305 |
JHI_St_60k_v1 |
GTGCATGCTACTATGATGAACAACCTAATAATGTGAAAGTGAAATCTCTTGTGGTATGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069306
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069306 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G01940.3 |
+1 |
2e-131 |
394 |
224/402 (56%) |
C2H2-like zinc finger protein | chr2:432652-434917 FORWARD LENGTH=446 |
Transcript Sequence (1579 bp)
>PGSC0003DMT400069306 1579 pgsc_dm_v3.4
AAACAAGTCTATGAAGAGAAAAAGCTGAAAGTCTAAAAAGATATCTCTAGAGATCAAAAA
AGCTAGCTTATGATACCTATATAGAAACCCTCTTTAATTTCTCCTTTTCACTAATTTCTA
TACACAATTAAAAATCCATTTTAAGTCATGTTTAATTCTTCATCAGACCCCTTCATGACT
TCCTCAGAGAATAATGGAAACAATTGTATTAACAACAACAAAAGAAAAAGAAGGCCAGCT
GGAACCCCAGATCCAGATGCAGAAGTGGTATCTTTATCACCAAAAACTTTATTAGAATCA
GATAGATACATATGTGAGATCTGTAATCAAGGATTTCAAAGGGATCAAAATTTACAAATG
CATAGAAGAAGGCATAAAGTACCATGGAAATTGCTAAAAAGAGAAACTCCTATTGTTAAA
AAAAGAGTATTTGTTTGTCCAGAGCCAACTTGTCTACATCATGACCCTTGTCATGCTCTT
GGTGATCTTGTTGGTATTAAAAAACACTTCAGGAGGAAACATAGTAATCACAAACAATGG
GTATGTGAGAAATGTAACAAAGGATATGCTGTTCAATCTGATTACAAGGCACATCTCAAA
ACATGTGGAACTCGTGGTCATTCTTGCGATTGCGGTCGCGTATTCTCCAGGGTGGAGAGC
TTCATAGAGCATCAAGACTTATGTAGTTTTGGAAGCCTTCGATCAGAATCACAATCTTTA
ATACAATTACCATCAGCACCTTGCCTTTCTCGTACAGCTTCAAGTCCTAGCCCTTCAAGT
GATCACACAAATAATCTCATCACTACTACTAATACAGTCCCATGGCCTAATTTTATTATG
AAAACTCCAAATGCCATAATAAAAAAACACAATTTAGAGCTCCAACTCTTGACTACTACT
ACTACAACAACATCTCCATCTAGCCCCTTTGATGTCTCCGTATCGTCAAAATCGCGCGAT
GATCATAATCTTCAACTCTCTATTGGTTCATCGGATCTAAGTGAGAAGAATGAGTCGGAG
AATAATAATAATGACACACACAGATCGAGAAATGGTGTAGAGGGGTTGAGGCAGGCGTTA
GCCGAAAAAGTGTACGCGGAAGAGGCGAGAAAGAAAGGGAGGAGAGAAATTGAATTGGCG
GAGGAAGAATTGGGTAATGCAAGGAGAATAAGGAGACAAGCACAAATGGAATTAGAAAAG
GCACAAGTATTGAAGGAAGAAGCAATAAGGAAAATTAATTTTACTCTTTCACAAATCACA
TGTCATGCTTGCAAACAAAAGTTCCAAGGTAAAAGGATAACAACAACAAGTATAGTTCCT
AATTCTCATCATGACCAAAATATTCATCTCAAGTATAGTACTTGCCCAACATCACTACAC
TAGTTGTACTATATTGTATTTCTTCATCTCTACTTTGGATTTATTTTTTTTTGTTACATT
TTTGGGCACTTAAGTTTGTTGTATGAATATAAGTCTAGTGTGGATGGTGCATGCTACTAT
GATGAACAACCTAATAATGTGAAAGTGAAATCTCTTGTGGTATGAAAATTTGTAGGGGTT
CTTGATTTTATTATTTTTT