Microarray Probes on PGSC0003DMT400069254
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16806_PI426222305 |
JHI_St_60k_v1 |
GTTGTCTCCTGTTTCCTACAAACATGACTTTTTCAATTAGAAAGACCTTTGTATTGTGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069254
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069254 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G50700.1 |
+1 |
3e-146 |
423 |
220/349 (63%) |
hydroxysteroid dehydrogenase 1 | chr5:20623259-20624995 REVERSE LENGTH=349 |
Transcript Sequence (1198 bp)
>PGSC0003DMT400069254 1198 pgsc_dm_v3.4
TTATTATTAAAAGAGTCCAAATCATCAGAGACAATGTTGGTTGAACTAATTCACAAATTT
CTCAACTTAGTCGCTCCTCCGGTTTCCTTCTTCAGCTTGCTTCTTTTCTTACCACCTTTT
CAATTTTTCAAGTGCGTTCTCTCAATTTTGGGCACACTTTTTAGTGAAGATGTTGCTGGA
AAGGTCGTCATCATCACTGGGGCTTCATCTGGCATTGGCGAGTATCTGGCATATGAGTAC
GCCAAAAGAGGAGCATGTTTAACCCTTGCAGCCAGAAGAGAAAGGAGTTTGAATGAAGTG
GCCGAAGGGGCACGTGAACTAGGCTCACCAGATGTTATAACAATTCAAGCTGATGTTTCG
AAAGCCGAAGACTGTAGAAGGATTGTTGATCAAACCATGAGTCACTTTGGCCGATTGGAC
CATCTGGTTAATAATGCTGGAGTGCACGCGATTGCTCTATTCGAAGATACAGAAGATGTC
ACTGATTTTAAATCTGTCATGGACATCAACTTCTGGGGTTCTGTTTACATGACCCGCTTT
GCGATTCCATATCTTAGGTATAGTGGGGGAAGGATCATTGTGCTTTCTTCATCTGCTTCT
TGGCTGCCTGTTCCAAGATCAAGCTTTTACAATGCAAGCAAAGCAGCAGTATCTCAATTC
TTCGAGACGTTAAGAATTGAGTTGGGGCAGGACATCAAGATAACTCTGGTGACGCCTGGC
TTTGTTGAATCTGAACTGACGCAAGGCAAATACATCGGTAAGGGTGGCGATGTAGAGGTT
GATCAAGGAATGAGGGATGTATTCATAGGCGCGACTCCAGTGGCTAAAGTTGAATCATGT
GCCAAGACAATCGTCAATAGTGCTTGCCGAGGCGAAAGATATGTTACAATACCAGCTTGG
TTTCGGGTTAGCTACTTGTGGAAGGTGTTTGCCCCCGAGGTGTTAGAATGGATGTATAGG
CTGATGCATCTCACCGGAACTTCACCAGAGGATGCACTTAGCAAGAAAGTAGTGGATTAT
ACTGGCGCGCAAAACGTGTTATATCCAGAGACTATCAGGACTGGAGAAACAAAAACTGAT
TAATGTTCTGATGTAAAAGAGGTTGTAGTTTCATGAGTTGTGTTGTCTCCTGTTTCCTAC
AAACATGACTTTTTCAATTAGAAAGACCTTTGTATTGTGACTATGAATAAAATTGAGG
