Microarray Probes on PGSC0003DMT400069218
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_16614_PI426222305 |
JHI_St_60k_v1 |
GCTACTGATCGATCGAGCAGGCTATCTAATAAATAATGTGTTAGGAGATTTGTACAATAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400069218
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400069218 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G24530.1 |
+2 |
3e-176 |
502 |
231/338 (68%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:8378964-8383154 FORWARD LENGTH=341 |
Transcript Sequence (1409 bp)
>PGSC0003DMT400069218 1409 pgsc_dm_v3.4
ATTATATATATATCAGCTAGTTTGAGCTTCAATGAAACTACTTGTACATTTCGATCGAGC
AATATTAATATTCTAGTTCTTGCATTACATCTCTATTTTTGTGTTCTTAAACATAATGGA
AACAACAAGTGTTCTTTCCGGTGGATTCAACCACTCAACCCTCCCTGAATCTTACGTTCG
ACCTGAATCCCAAAGACCCCGCATGTCTGAAGTTGTTGATCGTGATGATCTTGTTCCAGT
TATCGATATGTCTTGTACTGATAGGAACGTTATCGTTCATCAAATTGGCGAAGCTTGTCG
CCTTTATGGGTTTTTCCAGGTGATAAATCACGGTGTATCAAAGAAGGTTATGGATGAAAT
GTTGGGGGTAGCTCATGAATTTTTTAAGCTTCCAGTGGAAGAAAAGATGAAATTGTACTC
AGATGATCCATCAAAGACTATGAGATTATCAACTAGTTTTAATGTTAAGAAGGAAACTGT
TCATAATTGGAGAGATTATCTTAGGCTACACTGTTATCCTTTGGACAAATATGCCCCTGA
ATGGCCTTCTAATCCTCCTTCTTTCAGGGAAATAGTGAGCAAATATTGCATGGAAGTTAG
ACAAGTTGGATATAGATTAGAAGAAGCAATATCAGAGAGCCTAGGGCTCGAGAAAGATTG
TATTAAAAATGTGTTGGGTGAACAAGGACAACATATGGCTATCAATTTTTATCCTCCATG
TCCACAACCTGAACTAACTTATGGGTTACCAGCCCATACAGATCCAAATGCAATTACAAT
TCTTCTTCAAGATTTGCAAGTGGCTGGCCTTCAAGTTCTTAAGGATGGAGAATGGTTATC
TATTAAACCTCAACCTGATGCCTTTGTCATCAATCTTGGTGATCAATTGGAGGCATTGAG
TAATGGAAAGTATAAAAGTATATGGCATAGAGCTATTGTAAATTCAGATAAAGCAAGGAT
GTCTGTGGCTTCTTTCCTCTGTCCCAATGATTGTTCCATTATCAGTGCTCCAAAAACCTT
AATTGAAGATGGATCTTCAGCCATTTATCGAGATTTCACTTATACTGAATATTATGACAA
ATTTTGGAGCAGGAATTTAGACCAGGAATATTGTTTAGAACTTTTCAAGAACGATGGAAC
CTAGTACTTGTATGAGTTCGAAGTAATTATTTATAACTTTTGTATCTACCTAAGTGTGGT
TATCACACAGTTACCGTTCCATCGGGTCATCTAATAAATATGTTAGGAAATTAATCAAAT
TATACATCGACAGTATAAAGAATTTTTATATTTGTCCATATGTGTGATTTTGTAACGAAG
CTACTGATCGATCGAGCAGGCTATCTAATAAATAATGTGTTAGGAGATTTGTACAATAAT
TTACCTTTGCAAAAGTTCCATCGTCTCTT
